Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 Z69720.1-201ENST00000601483 472 ntBASIC22.05■■□□□ 1.12
TTC39AQ5SRH9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39AQ5SRH9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39AQ5SRH9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC22.05■■□□□ 1.12
TTC39AQ5SRH9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39AQ5SRH9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
TTC39AQ5SRH9 AC104581.1-202ENST00000635932 2618 ntBASIC22.05■■□□□ 1.12
TTC39AQ5SRH9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39AQ5SRH9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC39AQ5SRH9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 AC132938.6-201ENST00000623828 1655 ntBASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 KRT18P65-201ENST00000439811 1286 ntBASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 AC104819.1-201ENST00000504587 486 ntBASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 AC012615.1-201ENST00000565797 1299 ntBASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 AL020996.1-203ENST00000536896 2307 ntBASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
TTC39AQ5SRH9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 AC135776.1-201ENST00000319817 2481 ntBASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 AC093010.1-201ENST00000473625 1624 ntBASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 AP005901.3-202ENST00000581653 237 ntBASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 AC093677.2-201ENST00000600169 1863 ntBASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC39AQ5SRH9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 KRT17P6-201ENST00000453795 1220 ntBASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 ABR-217ENST00000572441 563 ntTSL 4 BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39AQ5SRH9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
TTC39AQ5SRH9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC22.02■■□□□ 1.11
TTC39AQ5SRH9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms