Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.8■□□□□ 0.92
USH1GQ495M9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
USH1GQ495M9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
USH1GQ495M9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USH1GQ495M9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
USH1GQ495M9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
USH1GQ495M9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USH1GQ495M9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
USH1GQ495M9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USH1GQ495M9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.79■□□□□ 0.92
USH1GQ495M9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.79■□□□□ 0.92
USH1GQ495M9 EMBP1-201ENST00000458200 901 ntBASIC20.79■□□□□ 0.92
USH1GQ495M9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
USH1GQ495M9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
USH1GQ495M9 AL353801.3-201ENST00000609898 542 ntBASIC20.79■□□□□ 0.92
USH1GQ495M9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
USH1GQ495M9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USH1GQ495M9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.79■□□□□ 0.92
USH1GQ495M9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USH1GQ495M9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USH1GQ495M9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USH1GQ495M9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
USH1GQ495M9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
USH1GQ495M9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
USH1GQ495M9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USH1GQ495M9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
USH1GQ495M9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USH1GQ495M9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USH1GQ495M9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
USH1GQ495M9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.78■□□□□ 0.92
USH1GQ495M9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USH1GQ495M9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.78■□□□□ 0.92
USH1GQ495M9 AC004870.1-201ENST00000315132 882 ntBASIC20.78■□□□□ 0.92
USH1GQ495M9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.78■□□□□ 0.92
USH1GQ495M9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USH1GQ495M9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
USH1GQ495M9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
USH1GQ495M9 AC026396.1-201ENST00000419388 421 ntBASIC20.78■□□□□ 0.92
USH1GQ495M9 MTCL1P1-201ENST00000446207 792 ntBASIC20.78■□□□□ 0.92
USH1GQ495M9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.78■□□□□ 0.92
USH1GQ495M9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.78■□□□□ 0.92
USH1GQ495M9 AC005336.2-201ENST00000593183 939 ntBASIC20.78■□□□□ 0.92
USH1GQ495M9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USH1GQ495M9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USH1GQ495M9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
USH1GQ495M9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USH1GQ495M9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USH1GQ495M9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USH1GQ495M9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.78■□□□□ 0.92
USH1GQ495M9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.78■□□□□ 0.92
USH1GQ495M9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
USH1GQ495M9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
USH1GQ495M9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USH1GQ495M9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.78■□□□□ 0.92
USH1GQ495M9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
USH1GQ495M9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
USH1GQ495M9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.77■□□□□ 0.92
USH1GQ495M9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.77■□□□□ 0.92
USH1GQ495M9 PHGDH-209ENST00000641074 1780 ntBASIC20.77■□□□□ 0.92
USH1GQ495M9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USH1GQ495M9 AC132938.6-201ENST00000623828 1655 ntBASIC20.77■□□□□ 0.92
USH1GQ495M9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
USH1GQ495M9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USH1GQ495M9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USH1GQ495M9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
USH1GQ495M9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.77■□□□□ 0.92
USH1GQ495M9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USH1GQ495M9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
USH1GQ495M9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
USH1GQ495M9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
USH1GQ495M9 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
USH1GQ495M9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.77■□□□□ 0.92
USH1GQ495M9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.77■□□□□ 0.92
USH1GQ495M9 AC096582.2-201ENST00000510860 516 ntBASIC20.77■□□□□ 0.92
USH1GQ495M9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.77■□□□□ 0.92
USH1GQ495M9 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.77■□□□□ 0.92
USH1GQ495M9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.77■□□□□ 0.92
USH1GQ495M9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USH1GQ495M9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.77■□□□□ 0.92
USH1GQ495M9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USH1GQ495M9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USH1GQ495M9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.77■□□□□ 0.91
USH1GQ495M9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USH1GQ495M9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USH1GQ495M9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
USH1GQ495M9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
USH1GQ495M9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USH1GQ495M9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USH1GQ495M9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
USH1GQ495M9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
USH1GQ495M9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.76■□□□□ 0.91
USH1GQ495M9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USH1GQ495M9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.76■□□□□ 0.91
USH1GQ495M9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.76■□□□□ 0.91
USH1GQ495M9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.76■□□□□ 0.91
USH1GQ495M9 BNIP3P18-201ENST00000593976 575 ntBASIC20.76■□□□□ 0.91
USH1GQ495M9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USH1GQ495M9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.76■□□□□ 0.91
USH1GQ495M9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USH1GQ495M9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms