Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.18■□□□□ 0.66
UBE3AQ05086 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3AQ05086 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3AQ05086 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3AQ05086 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.18■□□□□ 0.66
UBE3AQ05086 KRT18P3-201ENST00000451602 1288 ntBASIC19.18■□□□□ 0.66
UBE3AQ05086 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
UBE3AQ05086 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.18■□□□□ 0.66
UBE3AQ05086 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.18■□□□□ 0.66
UBE3AQ05086 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.18■□□□□ 0.66
UBE3AQ05086 RNA5SP415-201ENST00000517246 115 ntBASIC19.18■□□□□ 0.66
UBE3AQ05086 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.18■□□□□ 0.66
UBE3AQ05086 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.18■□□□□ 0.66
UBE3AQ05086 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
UBE3AQ05086 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.18■□□□□ 0.66
UBE3AQ05086 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3AQ05086 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3AQ05086 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3AQ05086 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3AQ05086 AL158211.5-201ENST00000623583 2518 ntBASIC19.18■□□□□ 0.66
UBE3AQ05086 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.18■□□□□ 0.66
UBE3AQ05086 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3AQ05086 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE3AQ05086 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
UBE3AQ05086 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.17■□□□□ 0.66
UBE3AQ05086 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3AQ05086 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.17■□□□□ 0.66
UBE3AQ05086 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3AQ05086 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3AQ05086 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
UBE3AQ05086 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3AQ05086 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3AQ05086 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.17■□□□□ 0.66
UBE3AQ05086 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.17■□□□□ 0.66
UBE3AQ05086 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.17■□□□□ 0.66
UBE3AQ05086 DNAJB3-201ENST00000446806 729 ntBASIC19.17■□□□□ 0.66
UBE3AQ05086 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.17■□□□□ 0.66
UBE3AQ05086 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3AQ05086 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.17■□□□□ 0.66
UBE3AQ05086 AC105339.3-201ENST00000560043 636 ntBASIC19.17■□□□□ 0.66
UBE3AQ05086 AC012640.2-201ENST00000561606 901 ntBASIC19.17■□□□□ 0.66
UBE3AQ05086 AC040169.1-201ENST00000565382 521 ntBASIC19.17■□□□□ 0.66
UBE3AQ05086 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
UBE3AQ05086 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3AQ05086 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
UBE3AQ05086 AC107918.4-202ENST00000641623 219 ntBASIC19.17■□□□□ 0.66
UBE3AQ05086 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.17■□□□□ 0.66
UBE3AQ05086 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3AQ05086 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3AQ05086 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3AQ05086 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3AQ05086 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
UBE3AQ05086 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3AQ05086 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3AQ05086 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE3AQ05086 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
UBE3AQ05086 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3AQ05086 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.16■□□□□ 0.66
UBE3AQ05086 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3AQ05086 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3AQ05086 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.16■□□□□ 0.66
UBE3AQ05086 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3AQ05086 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
UBE3AQ05086 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3AQ05086 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3AQ05086 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3AQ05086 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.16■□□□□ 0.66
UBE3AQ05086 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.16■□□□□ 0.66
UBE3AQ05086 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.16■□□□□ 0.66
UBE3AQ05086 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.16■□□□□ 0.66
UBE3AQ05086 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.16■□□□□ 0.66
UBE3AQ05086 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.16■□□□□ 0.66
UBE3AQ05086 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.16■□□□□ 0.66
UBE3AQ05086 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3AQ05086 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3AQ05086 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE3AQ05086 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.16■□□□□ 0.66
UBE3AQ05086 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.15■□□□□ 0.66
UBE3AQ05086 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.15■□□□□ 0.66
UBE3AQ05086 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
UBE3AQ05086 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.15■□□□□ 0.66
UBE3AQ05086 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
UBE3AQ05086 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.15■□□□□ 0.66
UBE3AQ05086 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3AQ05086 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3AQ05086 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3AQ05086 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.15■□□□□ 0.66
UBE3AQ05086 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.15■□□□□ 0.66
UBE3AQ05086 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
UBE3AQ05086 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3AQ05086 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3AQ05086 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3AQ05086 RPSAP43-201ENST00000402237 625 ntBASIC19.15■□□□□ 0.66
UBE3AQ05086 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.15■□□□□ 0.66
UBE3AQ05086 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBE3AQ05086 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.15■□□□□ 0.66
UBE3AQ05086 GPX1P2-201ENST00000429271 606 ntBASIC19.15■□□□□ 0.66
UBE3AQ05086 AC112698.1-201ENST00000510299 916 ntBASIC19.15■□□□□ 0.66
UBE3AQ05086 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.15■□□□□ 0.66
UBE3AQ05086 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms