Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 Z82202.1-201ENST00000623446 1880 ntBASIC20.93■□□□□ 0.94
HTRA3P83110 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA3P83110 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.93■□□□□ 0.94
HTRA3P83110 AC007967.3-201ENST00000434308 558 ntBASIC20.93■□□□□ 0.94
HTRA3P83110 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.93■□□□□ 0.94
HTRA3P83110 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.93■□□□□ 0.94
HTRA3P83110 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.93■□□□□ 0.94
HTRA3P83110 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.93■□□□□ 0.94
HTRA3P83110 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
HTRA3P83110 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA3P83110 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
HTRA3P83110 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HTRA3P83110 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
HTRA3P83110 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.93■□□□□ 0.94
HTRA3P83110 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.92■□□□□ 0.94
HTRA3P83110 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTRA3P83110 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HTRA3P83110 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HTRA3P83110 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTRA3P83110 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HTRA3P83110 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HTRA3P83110 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HTRA3P83110 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.92■□□□□ 0.94
HTRA3P83110 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTRA3P83110 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HTRA3P83110 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HTRA3P83110 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.92■□□□□ 0.94
HTRA3P83110 AC005237.2-201ENST00000434368 219 ntBASIC20.92■□□□□ 0.94
HTRA3P83110 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HTRA3P83110 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.92■□□□□ 0.94
HTRA3P83110 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HTRA3P83110 AC125807.1-201ENST00000483097 614 ntBASIC20.92■□□□□ 0.94
HTRA3P83110 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.92■□□□□ 0.94
HTRA3P83110 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTRA3P83110 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.92■□□□□ 0.94
HTRA3P83110 KRT8P47-201ENST00000604727 1398 ntBASIC20.92■□□□□ 0.94
HTRA3P83110 SIGLEC16-201ENST00000599858 1437 ntBASIC20.92■□□□□ 0.94
HTRA3P83110 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.92■□□□□ 0.94
HTRA3P83110 AC006116.8-202ENST00000587620 1550 ntBASIC20.92■□□□□ 0.94
HTRA3P83110 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HTRA3P83110 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HTRA3P83110 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.92■□□□□ 0.94
HTRA3P83110 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HTRA3P83110 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HTRA3P83110 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HTRA3P83110 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
HTRA3P83110 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HTRA3P83110 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HTRA3P83110 AC004945.1-201ENST00000416738 983 ntBASIC20.91■□□□□ 0.94
HTRA3P83110 AL512638.1-201ENST00000457493 794 ntBASIC20.91■□□□□ 0.94
HTRA3P83110 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.91■□□□□ 0.94
HTRA3P83110 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.91■□□□□ 0.94
HTRA3P83110 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.91■□□□□ 0.94
HTRA3P83110 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.91■□□□□ 0.94
HTRA3P83110 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.91■□□□□ 0.94
HTRA3P83110 AL512408.1-201ENST00000569378 2000 ntBASIC20.91■□□□□ 0.94
HTRA3P83110 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HTRA3P83110 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.91■□□□□ 0.94
HTRA3P83110 AC068137.2-201ENST00000605408 478 ntBASIC20.91■□□□□ 0.94
HTRA3P83110 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HTRA3P83110 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
HTRA3P83110 AC020907.5-201ENST00000624372 1936 ntBASIC20.9■□□□□ 0.94
HTRA3P83110 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HTRA3P83110 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.9■□□□□ 0.94
HTRA3P83110 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.9■□□□□ 0.94
HTRA3P83110 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HTRA3P83110 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HTRA3P83110 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HTRA3P83110 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.9■□□□□ 0.94
HTRA3P83110 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
HTRA3P83110 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HTRA3P83110 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HTRA3P83110 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HTRA3P83110 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HTRA3P83110 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.9■□□□□ 0.94
HTRA3P83110 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.9■□□□□ 0.94
HTRA3P83110 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.9■□□□□ 0.94
HTRA3P83110 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.9■□□□□ 0.94
HTRA3P83110 ADH5P3-201ENST00000433842 1137 ntBASIC20.9■□□□□ 0.94
HTRA3P83110 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.9■□□□□ 0.94
HTRA3P83110 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.9■□□□□ 0.94
HTRA3P83110 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.9■□□□□ 0.94
HTRA3P83110 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.9■□□□□ 0.94
HTRA3P83110 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.9■□□□□ 0.94
HTRA3P83110 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.9■□□□□ 0.94
HTRA3P83110 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HTRA3P83110 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HTRA3P83110 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
HTRA3P83110 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HTRA3P83110 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HTRA3P83110 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
HTRA3P83110 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.89■□□□□ 0.94
HTRA3P83110 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.89■□□□□ 0.93
HTRA3P83110 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.89■□□□□ 0.93
HTRA3P83110 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.89■□□□□ 0.93
HTRA3P83110 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.89■□□□□ 0.93
HTRA3P83110 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HTRA3P83110 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HTRA3P83110 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HTRA3P83110 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms