Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB38P57729 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB38P57729 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB38P57729 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB38P57729 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB38P57729 KRT18P65-201ENST00000439811 1286 ntBASIC17.05■□□□□ 0.32
RAB38P57729 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB38P57729 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB38P57729 BX276092.5-203ENST00000456199 560 ntBASIC17.05■□□□□ 0.32
RAB38P57729 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB38P57729 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RAB38P57729 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB38P57729 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB38P57729 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.05■□□□□ 0.32
RAB38P57729 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB38P57729 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB38P57729 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
RAB38P57729 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB38P57729 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB38P57729 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB38P57729 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB38P57729 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
RAB38P57729 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RAB38P57729 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB38P57729 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB38P57729 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB38P57729 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB38P57729 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB38P57729 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB38P57729 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB38P57729 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB38P57729 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RAB38P57729 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB38P57729 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RAB38P57729 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB38P57729 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB38P57729 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB38P57729 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB38P57729 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB38P57729 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.04■□□□□ 0.32
RAB38P57729 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RAB38P57729 DUTP2-201ENST00000519164 463 ntBASIC17.04■□□□□ 0.32
RAB38P57729 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.04■□□□□ 0.32
RAB38P57729 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.04■□□□□ 0.32
RAB38P57729 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RAB38P57729 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RAB38P57729 AC009154.2-201ENST00000621177 724 ntBASIC17.04■□□□□ 0.32
RAB38P57729 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB38P57729 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB38P57729 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB38P57729 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB38P57729 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RAB38P57729 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB38P57729 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
RAB38P57729 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB38P57729 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RAB38P57729 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB38P57729 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB38P57729 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB38P57729 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB38P57729 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB38P57729 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB38P57729 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB38P57729 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB38P57729 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB38P57729 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB38P57729 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB38P57729 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB38P57729 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB38P57729 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB38P57729 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
RAB38P57729 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB38P57729 GUSBP12-201ENST00000513727 720 ntBASIC17.03■□□□□ 0.32
RAB38P57729 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.03■□□□□ 0.32
RAB38P57729 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.03■□□□□ 0.32
RAB38P57729 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB38P57729 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB38P57729 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.03■□□□□ 0.32
RAB38P57729 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB38P57729 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RAB38P57729 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB38P57729 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
RAB38P57729 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB38P57729 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB38P57729 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB38P57729 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB38P57729 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB38P57729 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB38P57729 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
RAB38P57729 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RAB38P57729 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB38P57729 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB38P57729 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RAB38P57729 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB38P57729 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB38P57729 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB38P57729 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB38P57729 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB38P57729 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB38P57729 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms