Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC3P51654 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC3P51654 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC3P51654 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC3P51654 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.03■□□□□ 0.8
GPC3P51654 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.03■□□□□ 0.8
GPC3P51654 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GPC3P51654 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC3P51654 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.02■□□□□ 0.8
GPC3P51654 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
GPC3P51654 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GPC3P51654 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GPC3P51654 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.02■□□□□ 0.8
GPC3P51654 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.02■□□□□ 0.8
GPC3P51654 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC3P51654 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.02■□□□□ 0.8
GPC3P51654 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.02■□□□□ 0.8
GPC3P51654 VENTXP7-201ENST00000475503 772 ntBASIC20.02■□□□□ 0.8
GPC3P51654 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.02■□□□□ 0.8
GPC3P51654 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GPC3P51654 AC091304.2-201ENST00000564639 760 ntBASIC20.02■□□□□ 0.8
GPC3P51654 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.02■□□□□ 0.8
GPC3P51654 AC011840.4-201ENST00000578471 627 ntBASIC20.02■□□□□ 0.8
GPC3P51654 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.02■□□□□ 0.8
GPC3P51654 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GPC3P51654 AC099336.1-202ENST00000602961 463 ntBASIC20.02■□□□□ 0.8
GPC3P51654 AC138894.3-201ENST00000603787 634 ntBASIC20.02■□□□□ 0.8
GPC3P51654 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC3P51654 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GPC3P51654 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GPC3P51654 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC3P51654 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.02■□□□□ 0.8
GPC3P51654 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GPC3P51654 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC3P51654 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.02■□□□□ 0.79
GPC3P51654 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.02■□□□□ 0.79
GPC3P51654 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.02■□□□□ 0.79
GPC3P51654 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GPC3P51654 NSUN5P1-202ENST00000421140 1535 ntBASIC20.02■□□□□ 0.79
GPC3P51654 NSUN5P2-203ENST00000457352 1529 ntBASIC20.02■□□□□ 0.79
GPC3P51654 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
GPC3P51654 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC3P51654 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC3P51654 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GPC3P51654 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC3P51654 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC3P51654 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GPC3P51654 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC3P51654 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.01■□□□□ 0.79
GPC3P51654 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC3P51654 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC3P51654 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
GPC3P51654 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC3P51654 AC004870.1-201ENST00000315132 882 ntBASIC20.01■□□□□ 0.79
GPC3P51654 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GPC3P51654 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC3P51654 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.01■□□□□ 0.79
GPC3P51654 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.01■□□□□ 0.79
GPC3P51654 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GPC3P51654 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.01■□□□□ 0.79
GPC3P51654 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC3P51654 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.01■□□□□ 0.79
GPC3P51654 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.01■□□□□ 0.79
GPC3P51654 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.01■□□□□ 0.79
GPC3P51654 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
GPC3P51654 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
GPC3P51654 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.01■□□□□ 0.79
GPC3P51654 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GPC3P51654 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC3P51654 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
GPC3P51654 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
GPC3P51654 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.01■□□□□ 0.79
GPC3P51654 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.01■□□□□ 0.79
GPC3P51654 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
GPC3P51654 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
GPC3P51654 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
GPC3P51654 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20■□□□□ 0.79
GPC3P51654 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GPC3P51654 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GPC3P51654 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
GPC3P51654 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GPC3P51654 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GPC3P51654 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20■□□□□ 0.79
GPC3P51654 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20■□□□□ 0.79
GPC3P51654 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
GPC3P51654 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
GPC3P51654 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20■□□□□ 0.79
GPC3P51654 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20■□□□□ 0.79
GPC3P51654 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
GPC3P51654 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20■□□□□ 0.79
GPC3P51654 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
GPC3P51654 ANKRD20A8P-203ENST00000641373 517 ntBASIC20■□□□□ 0.79
GPC3P51654 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GPC3P51654 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
GPC3P51654 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20■□□□□ 0.79
GPC3P51654 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GPC3P51654 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GPC3P51654 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20■□□□□ 0.79
GPC3P51654 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20■□□□□ 0.79
GPC3P51654 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms