Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.27■□□□□ 0.52
CCNFP41002 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCNFP41002 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
CCNFP41002 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.27■□□□□ 0.52
CCNFP41002 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CCNFP41002 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCNFP41002 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCNFP41002 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCNFP41002 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCNFP41002 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCNFP41002 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCNFP41002 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCNFP41002 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.26■□□□□ 0.51
CCNFP41002 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CCNFP41002 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.26■□□□□ 0.51
CCNFP41002 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.26■□□□□ 0.51
CCNFP41002 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.26■□□□□ 0.51
CCNFP41002 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.26■□□□□ 0.51
CCNFP41002 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCNFP41002 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.26■□□□□ 0.51
CCNFP41002 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.26■□□□□ 0.51
CCNFP41002 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.26■□□□□ 0.51
CCNFP41002 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCNFP41002 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.26■□□□□ 0.51
CCNFP41002 MIR3180-5-201ENST00000583743 153 ntBASIC18.26■□□□□ 0.51
CCNFP41002 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.26■□□□□ 0.51
CCNFP41002 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.26■□□□□ 0.51
CCNFP41002 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCNFP41002 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.26■□□□□ 0.51
CCNFP41002 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.26■□□□□ 0.51
CCNFP41002 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNFP41002 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCNFP41002 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.25■□□□□ 0.51
CCNFP41002 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCNFP41002 AC009053.2-201ENST00000563701 2365 ntBASIC18.25■□□□□ 0.51
CCNFP41002 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCNFP41002 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 HMGA1P5-201ENST00000412453 271 ntBASIC18.25■□□□□ 0.51
CCNFP41002 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.25■□□□□ 0.51
CCNFP41002 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CCNFP41002 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.25■□□□□ 0.51
CCNFP41002 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
CCNFP41002 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CCNFP41002 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.25■□□□□ 0.51
CCNFP41002 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.25■□□□□ 0.51
CCNFP41002 SDHAP2-201ENST00000455183 2001 ntBASIC18.25■□□□□ 0.51
CCNFP41002 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCNFP41002 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.24■□□□□ 0.51
CCNFP41002 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
CCNFP41002 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 AC093010.1-201ENST00000473625 1624 ntBASIC18.24■□□□□ 0.51
CCNFP41002 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.24■□□□□ 0.51
CCNFP41002 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.24■□□□□ 0.51
CCNFP41002 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCNFP41002 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms