Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.24■□□□□ 0.51
LSP1P33241 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LSP1P33241 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
LSP1P33241 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.24■□□□□ 0.51
LSP1P33241 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LSP1P33241 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.24■□□□□ 0.51
LSP1P33241 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LSP1P33241 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.24■□□□□ 0.51
LSP1P33241 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSP1P33241 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSP1P33241 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LSP1P33241 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LSP1P33241 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LSP1P33241 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LSP1P33241 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LSP1P33241 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSP1P33241 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSP1P33241 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
LSP1P33241 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LSP1P33241 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSP1P33241 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.23■□□□□ 0.51
LSP1P33241 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.23■□□□□ 0.51
LSP1P33241 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LSP1P33241 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
LSP1P33241 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.23■□□□□ 0.51
LSP1P33241 AL512625.2-201ENST00000417533 625 ntBASIC18.23■□□□□ 0.51
LSP1P33241 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.23■□□□□ 0.51
LSP1P33241 AC022517.1-201ENST00000592429 346 ntBASIC18.23■□□□□ 0.51
LSP1P33241 AL121832.2-201ENST00000610979 668 ntBASIC18.23■□□□□ 0.51
LSP1P33241 AC092437.1-201ENST00000624794 1048 ntBASIC18.23■□□□□ 0.51
LSP1P33241 HLA-A-209ENST00000638375 975 ntBASIC18.23■□□□□ 0.51
LSP1P33241 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSP1P33241 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSP1P33241 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LSP1P33241 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSP1P33241 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.23■□□□□ 0.51
LSP1P33241 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.23■□□□□ 0.51
LSP1P33241 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSP1P33241 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LSP1P33241 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSP1P33241 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSP1P33241 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSP1P33241 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.22■□□□□ 0.51
LSP1P33241 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LSP1P33241 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LSP1P33241 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LSP1P33241 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSP1P33241 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSP1P33241 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LSP1P33241 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
LSP1P33241 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSP1P33241 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSP1P33241 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.22■□□□□ 0.51
LSP1P33241 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSP1P33241 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LSP1P33241 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LSP1P33241 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSP1P33241 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSP1P33241 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LSP1P33241 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LSP1P33241 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LSP1P33241 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.22■□□□□ 0.51
LSP1P33241 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSP1P33241 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.22■□□□□ 0.51
LSP1P33241 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSP1P33241 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.22■□□□□ 0.51
LSP1P33241 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.22■□□□□ 0.51
LSP1P33241 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.21■□□□□ 0.51
LSP1P33241 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSP1P33241 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.21■□□□□ 0.51
LSP1P33241 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSP1P33241 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSP1P33241 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSP1P33241 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSP1P33241 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSP1P33241 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LSP1P33241 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.21■□□□□ 0.51
LSP1P33241 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSP1P33241 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSP1P33241 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LSP1P33241 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSP1P33241 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LSP1P33241 POU5F1P3-201ENST00000428824 1078 ntBASIC18.21■□□□□ 0.51
LSP1P33241 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.21■□□□□ 0.51
LSP1P33241 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LSP1P33241 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.21■□□□□ 0.51
LSP1P33241 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSP1P33241 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSP1P33241 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.21■□□□□ 0.51
LSP1P33241 AC092666.2-201ENST00000613287 246 ntBASIC18.21■□□□□ 0.51
LSP1P33241 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSP1P33241 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSP1P33241 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSP1P33241 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LSP1P33241 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.21■□□□□ 0.51
LSP1P33241 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LSP1P33241 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSP1P33241 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSP1P33241 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSP1P33241 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms