Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP11P24347 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP11P24347 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
MMP11P24347 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
MMP11P24347 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MMP11P24347 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
MMP11P24347 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.25■□□□□ 0.35
MMP11P24347 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.25■□□□□ 0.35
MMP11P24347 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
MMP11P24347 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
MMP11P24347 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
MMP11P24347 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
MMP11P24347 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 KRT8P50-201ENST00000562022 1438 ntBASIC17.24■□□□□ 0.35
MMP11P24347 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
MMP11P24347 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.24■□□□□ 0.35
MMP11P24347 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.24■□□□□ 0.35
MMP11P24347 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.24■□□□□ 0.35
MMP11P24347 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.24■□□□□ 0.35
MMP11P24347 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
MMP11P24347 AP002414.4-201ENST00000589764 1148 ntBASIC17.24■□□□□ 0.35
MMP11P24347 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.24■□□□□ 0.35
MMP11P24347 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.24■□□□□ 0.35
MMP11P24347 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
MMP11P24347 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.24■□□□□ 0.35
MMP11P24347 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
MMP11P24347 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MMP11P24347 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
MMP11P24347 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
MMP11P24347 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.23■□□□□ 0.35
MMP11P24347 ABALON-201ENST00000629058 1903 ntBASIC17.23■□□□□ 0.35
MMP11P24347 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP11P24347 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP11P24347 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MMP11P24347 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP11P24347 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.23■□□□□ 0.35
MMP11P24347 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MMP11P24347 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP11P24347 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP11P24347 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP11P24347 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP11P24347 Z83836.1-201ENST00000624605 1642 ntBASIC17.23■□□□□ 0.35
MMP11P24347 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP11P24347 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.23■□□□□ 0.35
MMP11P24347 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MMP11P24347 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.23■□□□□ 0.35
MMP11P24347 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.23■□□□□ 0.35
MMP11P24347 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
MMP11P24347 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.23■□□□□ 0.35
MMP11P24347 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.23■□□□□ 0.35
MMP11P24347 AC005332.3-201ENST00000589904 676 ntBASIC17.23■□□□□ 0.35
MMP11P24347 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.23■□□□□ 0.35
MMP11P24347 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP11P24347 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP11P24347 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MMP11P24347 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
MMP11P24347 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MMP11P24347 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MMP11P24347 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP11P24347 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP11P24347 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.22■□□□□ 0.35
MMP11P24347 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP11P24347 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
MMP11P24347 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP11P24347 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP11P24347 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP11P24347 AC068880.1-201ENST00000507289 2297 ntBASIC17.22■□□□□ 0.35
MMP11P24347 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP11P24347 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP11P24347 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP11P24347 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP11P24347 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.22■□□□□ 0.35
MMP11P24347 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.22■□□□□ 0.35
MMP11P24347 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.22■□□□□ 0.35
MMP11P24347 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.22■□□□□ 0.35
MMP11P24347 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.22■□□□□ 0.35
MMP11P24347 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MMP11P24347 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
MMP11P24347 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP11P24347 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP11P24347 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MMP11P24347 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms