Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.94□□□□□ -0.18
RAB4AP20338 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB4AP20338 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB4AP20338 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB4AP20338 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB4AP20338 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB4AP20338 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB4AP20338 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
RAB4AP20338 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB4AP20338 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB4AP20338 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB4AP20338 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB4AP20338 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB4AP20338 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RAB4AP20338 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RAB4AP20338 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB4AP20338 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB4AP20338 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB4AP20338 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB4AP20338 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RAB4AP20338 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB4AP20338 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RAB4AP20338 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RAB4AP20338 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
RAB4AP20338 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB4AP20338 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB4AP20338 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB4AP20338 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RAB4AP20338 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB4AP20338 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RAB4AP20338 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB4AP20338 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RAB4AP20338 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB4AP20338 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RAB4AP20338 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 KRT19P1-201ENST00000405746 1186 ntBASIC13.93□□□□□ -0.18
RAB4AP20338 AC123595.1-201ENST00000440769 1046 ntBASIC13.93□□□□□ -0.18
RAB4AP20338 YBX1P1-201ENST00000445822 960 ntBASIC13.93□□□□□ -0.18
RAB4AP20338 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.93□□□□□ -0.18
RAB4AP20338 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB4AP20338 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB4AP20338 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.93□□□□□ -0.18
RAB4AP20338 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RAB4AP20338 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RAB4AP20338 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RAB4AP20338 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB4AP20338 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
RAB4AP20338 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
RAB4AP20338 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RAB4AP20338 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB4AP20338 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB4AP20338 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RAB4AP20338 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
RAB4AP20338 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
RAB4AP20338 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 SDHAP1-207ENST00000440850 2000 ntBASIC13.92□□□□□ -0.18
RAB4AP20338 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.92□□□□□ -0.18
RAB4AP20338 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB4AP20338 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms