Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DPA1P20036 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DPA1P20036 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DPA1P20036 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
HLA-DPA1P20036 FLJ13224-201ENST00000313737 1514 ntBASIC18.33■□□□□ 0.53
HLA-DPA1P20036 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DPA1P20036 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DPA1P20036 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DPA1P20036 KRT89P-201ENST00000620027 1478 ntBASIC18.33■□□□□ 0.53
HLA-DPA1P20036 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DPA1P20036 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DPA1P20036 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
HLA-DPA1P20036 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DPA1P20036 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 HLA-F-220ENST00000434407 884 ntBASIC18.33■□□□□ 0.52
HLA-DPA1P20036 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 AC063952.2-201ENST00000498792 1227 ntBASIC18.33■□□□□ 0.52
HLA-DPA1P20036 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 AC024563.2-201ENST00000603282 481 ntBASIC18.33■□□□□ 0.52
HLA-DPA1P20036 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 HTR7P1-202ENST00000624664 4411 ntBASIC18.33■□□□□ 0.52
HLA-DPA1P20036 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DPA1P20036 AC138028.4-201ENST00000564984 1845 ntBASIC18.33■□□□□ 0.52
HLA-DPA1P20036 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 KRT18P38-201ENST00000449496 1282 ntBASIC18.32■□□□□ 0.52
HLA-DPA1P20036 AL359075.1-203ENST00000462729 1002 ntBASIC18.32■□□□□ 0.52
HLA-DPA1P20036 AC113404.2-201ENST00000507884 177 ntBASIC18.32■□□□□ 0.52
HLA-DPA1P20036 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPA1P20036 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 DUX4L26-201ENST00000489078 1255 ntBASIC18.31■□□□□ 0.52
HLA-DPA1P20036 LINC01238-205ENST00000567549 1107 ntBASIC18.31■□□□□ 0.52
HLA-DPA1P20036 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.31■□□□□ 0.52
HLA-DPA1P20036 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DPA1P20036 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms