Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
TOP3BO95985 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TOP3BO95985 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TOP3BO95985 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TOP3BO95985 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TOP3BO95985 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TOP3BO95985 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.61■□□□□ 0.57
TOP3BO95985 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOP3BO95985 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOP3BO95985 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.61■□□□□ 0.57
TOP3BO95985 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOP3BO95985 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TOP3BO95985 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.61■□□□□ 0.57
TOP3BO95985 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOP3BO95985 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOP3BO95985 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TOP3BO95985 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.61■□□□□ 0.57
TOP3BO95985 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.61■□□□□ 0.57
TOP3BO95985 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TOP3BO95985 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.61■□□□□ 0.57
TOP3BO95985 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.61■□□□□ 0.57
TOP3BO95985 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.61■□□□□ 0.57
TOP3BO95985 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOP3BO95985 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOP3BO95985 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TOP3BO95985 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
TOP3BO95985 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TOP3BO95985 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP3BO95985 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TOP3BO95985 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TOP3BO95985 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TOP3BO95985 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.6■□□□□ 0.57
TOP3BO95985 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP3BO95985 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP3BO95985 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP3BO95985 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
TOP3BO95985 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TOP3BO95985 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.6■□□□□ 0.57
TOP3BO95985 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TOP3BO95985 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.6■□□□□ 0.57
TOP3BO95985 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TOP3BO95985 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
TOP3BO95985 IFNL4P1-201ENST00000607083 540 ntBASIC18.6■□□□□ 0.57
TOP3BO95985 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.6■□□□□ 0.57
TOP3BO95985 AC139530.3-201ENST00000620344 690 ntBASIC18.6■□□□□ 0.57
TOP3BO95985 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TOP3BO95985 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TOP3BO95985 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TOP3BO95985 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.6■□□□□ 0.57
TOP3BO95985 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
TOP3BO95985 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.6■□□□□ 0.57
TOP3BO95985 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
TOP3BO95985 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TOP3BO95985 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP3BO95985 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP3BO95985 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TOP3BO95985 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TOP3BO95985 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.6■□□□□ 0.57
TOP3BO95985 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.59■□□□□ 0.57
TOP3BO95985 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.59■□□□□ 0.57
TOP3BO95985 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.59■□□□□ 0.57
TOP3BO95985 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP3BO95985 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.59■□□□□ 0.57
TOP3BO95985 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.59■□□□□ 0.57
TOP3BO95985 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP3BO95985 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP3BO95985 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.59■□□□□ 0.57
TOP3BO95985 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP3BO95985 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP3BO95985 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP3BO95985 STARP1-201ENST00000397973 869 ntBASIC18.59■□□□□ 0.57
TOP3BO95985 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.59■□□□□ 0.57
TOP3BO95985 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.59■□□□□ 0.57
TOP3BO95985 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.59■□□□□ 0.57
TOP3BO95985 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP3BO95985 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.59■□□□□ 0.57
TOP3BO95985 MIR3180-1-201ENST00000580374 94 ntBASIC18.59■□□□□ 0.57
TOP3BO95985 MIR3180-3-201ENST00000584616 94 ntBASIC18.59■□□□□ 0.57
TOP3BO95985 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.59■□□□□ 0.57
TOP3BO95985 AC104692.2-201ENST00000603054 253 ntBASIC18.59■□□□□ 0.57
TOP3BO95985 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.59■□□□□ 0.57
TOP3BO95985 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TOP3BO95985 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP3BO95985 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP3BO95985 AC008764.6-201ENST00000595909 2069 ntBASIC18.59■□□□□ 0.57
TOP3BO95985 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP3BO95985 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TOP3BO95985 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TOP3BO95985 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.59■□□□□ 0.57
TOP3BO95985 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.58■□□□□ 0.57
TOP3BO95985 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TOP3BO95985 KRT8P32-201ENST00000512863 1461 ntBASIC18.58■□□□□ 0.57
TOP3BO95985 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TOP3BO95985 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.57
TOP3BO95985 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.58■□□□□ 0.57
TOP3BO95985 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TOP3BO95985 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TOP3BO95985 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.58■□□□□ 0.56
TOP3BO95985 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.58■□□□□ 0.56
TOP3BO95985 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms