Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SART3-203ENST00000546611 1184 ntBASIC21.16■□□□□ 0.98
CTNND1O60716 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21.16■□□□□ 0.98
CTNND1O60716 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.16■□□□□ 0.98
CTNND1O60716 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.16■□□□□ 0.98
CTNND1O60716 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTNND1O60716 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTNND1O60716 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CTNND1O60716 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTNND1O60716 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTNND1O60716 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTNND1O60716 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
CTNND1O60716 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTNND1O60716 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTNND1O60716 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.15■□□□□ 0.98
CTNND1O60716 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTNND1O60716 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.15■□□□□ 0.98
CTNND1O60716 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTNND1O60716 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.15■□□□□ 0.98
CTNND1O60716 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.15■□□□□ 0.98
CTNND1O60716 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTNND1O60716 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTNND1O60716 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
CTNND1O60716 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTNND1O60716 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.15■□□□□ 0.98
CTNND1O60716 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
CTNND1O60716 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.15■□□□□ 0.98
CTNND1O60716 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTNND1O60716 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTNND1O60716 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTNND1O60716 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTNND1O60716 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CTNND1O60716 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTNND1O60716 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.14■□□□□ 0.98
CTNND1O60716 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTNND1O60716 AL356309.3-201ENST00000624132 1934 ntBASIC21.14■□□□□ 0.98
CTNND1O60716 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.14■□□□□ 0.97
CTNND1O60716 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.14■□□□□ 0.97
CTNND1O60716 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTNND1O60716 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CTNND1O60716 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTNND1O60716 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CTNND1O60716 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.14■□□□□ 0.97
CTNND1O60716 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.14■□□□□ 0.97
CTNND1O60716 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTNND1O60716 TERC-201ENST00000602385 541 ntBASIC21.14■□□□□ 0.97
CTNND1O60716 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.14■□□□□ 0.97
CTNND1O60716 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTNND1O60716 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTNND1O60716 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTNND1O60716 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTNND1O60716 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTNND1O60716 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTNND1O60716 AL020996.1-203ENST00000536896 2307 ntBASIC21.13■□□□□ 0.97
CTNND1O60716 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNND1O60716 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNND1O60716 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTNND1O60716 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTNND1O60716 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNND1O60716 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
CTNND1O60716 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.13■□□□□ 0.97
CTNND1O60716 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNND1O60716 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNND1O60716 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CTNND1O60716 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNND1O60716 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNND1O60716 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNND1O60716 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
CTNND1O60716 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.13■□□□□ 0.97
CTNND1O60716 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.13■□□□□ 0.97
CTNND1O60716 IGHV3-22-201ENST00000520721 359 ntBASIC21.13■□□□□ 0.97
CTNND1O60716 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.13■□□□□ 0.97
CTNND1O60716 AC145285.3-201ENST00000564603 959 ntBASIC21.13■□□□□ 0.97
CTNND1O60716 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNND1O60716 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTNND1O60716 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTNND1O60716 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNND1O60716 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNND1O60716 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CTNND1O60716 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.13■□□□□ 0.97
CTNND1O60716 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.13■□□□□ 0.97
CTNND1O60716 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTNND1O60716 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTNND1O60716 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTNND1O60716 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.12■□□□□ 0.97
CTNND1O60716 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CTNND1O60716 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTNND1O60716 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTNND1O60716 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.12■□□□□ 0.97
CTNND1O60716 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTNND1O60716 RPS2P1-201ENST00000434010 821 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms