Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.14■□□□□ 0.49
MID1O15344 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MID1O15344 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MID1O15344 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
MID1O15344 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MID1O15344 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MID1O15344 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.14■□□□□ 0.49
MID1O15344 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.13■□□□□ 0.49
MID1O15344 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.13■□□□□ 0.49
MID1O15344 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.13■□□□□ 0.49
MID1O15344 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 RCN1P2-201ENST00000398357 915 ntBASIC18.13■□□□□ 0.49
MID1O15344 MRPL3P1-201ENST00000400109 1033 ntBASIC18.13■□□□□ 0.49
MID1O15344 KRT18P65-201ENST00000439811 1286 ntBASIC18.13■□□□□ 0.49
MID1O15344 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
MID1O15344 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.13■□□□□ 0.49
MID1O15344 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
MID1O15344 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 TP73-AS1-210ENST00000637775 1455 ntBASIC18.13■□□□□ 0.49
MID1O15344 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MID1O15344 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MID1O15344 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.12■□□□□ 0.49
MID1O15344 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MID1O15344 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MID1O15344 CROCCP3-202ENST00000420820 1947 ntBASIC18.12■□□□□ 0.49
MID1O15344 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.12■□□□□ 0.49
MID1O15344 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MID1O15344 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
MID1O15344 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MID1O15344 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.12■□□□□ 0.49
MID1O15344 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.12■□□□□ 0.49
MID1O15344 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MID1O15344 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.12■□□□□ 0.49
MID1O15344 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MID1O15344 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
MID1O15344 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.12■□□□□ 0.49
MID1O15344 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MID1O15344 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.12■□□□□ 0.49
MID1O15344 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
MID1O15344 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MID1O15344 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
MID1O15344 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.12■□□□□ 0.49
MID1O15344 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MID1O15344 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MID1O15344 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.12■□□□□ 0.49
MID1O15344 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MID1O15344 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
MID1O15344 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
MID1O15344 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MID1O15344 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.12■□□□□ 0.49
MID1O15344 ESPNP-201ENST00000270691 2015 ntBASIC18.11■□□□□ 0.49
MID1O15344 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MID1O15344 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MID1O15344 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MID1O15344 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MID1O15344 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MID1O15344 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MID1O15344 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
MID1O15344 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.11■□□□□ 0.49
MID1O15344 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
MID1O15344 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.11■□□□□ 0.49
MID1O15344 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
MID1O15344 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MID1O15344 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.11■□□□□ 0.49
MID1O15344 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MID1O15344 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
MID1O15344 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MID1O15344 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.11■□□□□ 0.49
MID1O15344 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
MID1O15344 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
MID1O15344 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.11■□□□□ 0.49
MID1O15344 AC132008.2-207ENST00000454517 770 ntBASIC18.11■□□□□ 0.49
MID1O15344 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.11■□□□□ 0.49
MID1O15344 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.11■□□□□ 0.49
MID1O15344 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.11■□□□□ 0.49
MID1O15344 AC106795.1-205ENST00000512851 1056 ntBASIC18.11■□□□□ 0.49
MID1O15344 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.11■□□□□ 0.49
MID1O15344 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.11■□□□□ 0.49
MID1O15344 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.11■□□□□ 0.49
MID1O15344 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
MID1O15344 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
MID1O15344 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms