Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 KRT17P2-201ENST00000300992 1314 ntBASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 AC108860.2-201ENST00000562760 2183 ntBASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TCRBV7S3A2A0A539 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 AC012313.1-201ENST00000593393 3059 ntBASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 MIR4497-201ENST00000583208 89 ntBASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 FAM87A-204ENST00000613235 858 ntBASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
TCRBV7S3A2A0A539 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
TCRBV7S3A2A0A539 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TCRBV7S3A2A0A539 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 ECEL1P2-202ENST00000465689 757 ntBASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 AC141586.5-201ENST00000624546 2050 ntBASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 AC106820.2-201ENST00000563775 3264 ntBASIC18.45■□□□□ 0.54
TCRBV7S3A2A0A539 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 AC080080.1-201ENST00000625121 2420 ntBASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV7S3A2A0A539 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms