Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 AC142086.2-201ENST00000569753 217 ntBASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 AC133963.1-201ENST00000504166 1679 ntBASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 AC022211.2-201ENST00000585075 2527 ntBASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 AL353807.1-201ENST00000427475 662 ntBASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 RPS2P4-201ENST00000476944 856 ntBASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 AC110285.5-201ENST00000611501 352 ntBASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 GPAT2P1-201ENST00000444924 1672 ntBASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TRBV27A0A0K0K1C4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 TBC1D3P2-202ENST00000577902 1649 ntBASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 NKILA-202ENST00000614771 2598 ntBASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 AC008040.2-201ENST00000461049 708 ntBASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 AC026366.1-201ENST00000488803 879 ntBASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 AC124016.1-201ENST00000609552 612 ntBASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 AL109923.1-201ENST00000618799 583 ntBASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRBV27A0A0K0K1C4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms