Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC30.13■■■□□ 2.41
BIVM-ERCC5R4GMW8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC30.13■■■□□ 2.41
BIVM-ERCC5R4GMW8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
BIVM-ERCC5R4GMW8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
BIVM-ERCC5R4GMW8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
BIVM-ERCC5R4GMW8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC30.12■■■□□ 2.41
BIVM-ERCC5R4GMW8 AC108751.1-201ENST00000490852 363 ntBASIC30.12■■■□□ 2.41
BIVM-ERCC5R4GMW8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
BIVM-ERCC5R4GMW8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC30.12■■■□□ 2.41
BIVM-ERCC5R4GMW8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
BIVM-ERCC5R4GMW8 AC006557.2-201ENST00000592985 1240 ntBASIC30.12■■■□□ 2.41
BIVM-ERCC5R4GMW8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC30.12■■■□□ 2.41
BIVM-ERCC5R4GMW8 GMCL1P1-201ENST00000463439 1581 ntBASIC30.12■■■□□ 2.41
BIVM-ERCC5R4GMW8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
BIVM-ERCC5R4GMW8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC30.12■■■□□ 2.41
BIVM-ERCC5R4GMW8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC30.12■■■□□ 2.41
BIVM-ERCC5R4GMW8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC30.12■■■□□ 2.41
BIVM-ERCC5R4GMW8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
BIVM-ERCC5R4GMW8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
BIVM-ERCC5R4GMW8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC30.12■■■□□ 2.41
BIVM-ERCC5R4GMW8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
BIVM-ERCC5R4GMW8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
BIVM-ERCC5R4GMW8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC30.11■■■□□ 2.41
BIVM-ERCC5R4GMW8 AC004967.1-201ENST00000453589 447 ntBASIC30.11■■■□□ 2.41
BIVM-ERCC5R4GMW8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC30.11■■■□□ 2.41
BIVM-ERCC5R4GMW8 AL353593.2-201ENST00000602529 1483 ntBASIC30.11■■■□□ 2.41
BIVM-ERCC5R4GMW8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
BIVM-ERCC5R4GMW8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
BIVM-ERCC5R4GMW8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
BIVM-ERCC5R4GMW8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
BIVM-ERCC5R4GMW8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC30.11■■■□□ 2.41
BIVM-ERCC5R4GMW8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC30.11■■■□□ 2.41
BIVM-ERCC5R4GMW8 HNRNPA1P28-201ENST00000424481 961 ntBASIC30.11■■■□□ 2.41
BIVM-ERCC5R4GMW8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC30.11■■■□□ 2.41
BIVM-ERCC5R4GMW8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC30.11■■■□□ 2.41
BIVM-ERCC5R4GMW8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC30.11■■■□□ 2.41
BIVM-ERCC5R4GMW8 AL022326.1-202ENST00000641533 845 ntBASIC30.11■■■□□ 2.41
BIVM-ERCC5R4GMW8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
BIVM-ERCC5R4GMW8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
BIVM-ERCC5R4GMW8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
BIVM-ERCC5R4GMW8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
BIVM-ERCC5R4GMW8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
BIVM-ERCC5R4GMW8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
BIVM-ERCC5R4GMW8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
BIVM-ERCC5R4GMW8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
BIVM-ERCC5R4GMW8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
BIVM-ERCC5R4GMW8 DNAJB3-201ENST00000446806 729 ntBASIC30.1■■■□□ 2.41
BIVM-ERCC5R4GMW8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
BIVM-ERCC5R4GMW8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
BIVM-ERCC5R4GMW8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
BIVM-ERCC5R4GMW8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
BIVM-ERCC5R4GMW8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
BIVM-ERCC5R4GMW8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
BIVM-ERCC5R4GMW8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC30.09■■■□□ 2.41
BIVM-ERCC5R4GMW8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
BIVM-ERCC5R4GMW8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC30.09■■■□□ 2.41
BIVM-ERCC5R4GMW8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC30.09■■■□□ 2.41
BIVM-ERCC5R4GMW8 AP006288.1-201ENST00000446065 395 ntBASIC30.09■■■□□ 2.41
BIVM-ERCC5R4GMW8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
BIVM-ERCC5R4GMW8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC30.09■■■□□ 2.41
BIVM-ERCC5R4GMW8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC30.09■■■□□ 2.41
BIVM-ERCC5R4GMW8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC30.08■■■□□ 2.41
BIVM-ERCC5R4GMW8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
BIVM-ERCC5R4GMW8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC30.08■■■□□ 2.41
BIVM-ERCC5R4GMW8 AC136632.2-201ENST00000512891 861 ntBASIC30.08■■■□□ 2.41
BIVM-ERCC5R4GMW8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC30.08■■■□□ 2.41
BIVM-ERCC5R4GMW8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC30.08■■■□□ 2.41
BIVM-ERCC5R4GMW8 AC064836.3-201ENST00000607928 673 ntBASIC30.08■■■□□ 2.41
BIVM-ERCC5R4GMW8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC30.08■■■□□ 2.41
BIVM-ERCC5R4GMW8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC30.08■■■□□ 2.41
BIVM-ERCC5R4GMW8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
BIVM-ERCC5R4GMW8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
BIVM-ERCC5R4GMW8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC30.08■■■□□ 2.41
BIVM-ERCC5R4GMW8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
BIVM-ERCC5R4GMW8 AL031598.1-201ENST00000561511 1773 ntBASIC30.08■■■□□ 2.41
BIVM-ERCC5R4GMW8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC30.08■■■□□ 2.41
BIVM-ERCC5R4GMW8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
BIVM-ERCC5R4GMW8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
BIVM-ERCC5R4GMW8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 KLF4P1-201ENST00000412782 1185 ntBASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
BIVM-ERCC5R4GMW8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
BIVM-ERCC5R4GMW8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
BIVM-ERCC5R4GMW8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms