Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
TRAPPC1Q9Y5R8 AC007326.2-201ENST00000624224 7579 ntBASIC13.82□□□□□ -0.2
TRAPPC1Q9Y5R8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC1Q9Y5R8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC1Q9Y5R8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 AC112777.1-201ENST00000540175 1423 ntBASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 AGGF1P2-201ENST00000426656 2106 ntBASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 AC092850.2-201ENST00000623821 2697 ntBASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAPPC1Q9Y5R8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 AC008556.1-201ENST00000610908 2040 ntBASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 MFSD11-216ENST00000590393 1141 ntBASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 TPRG1LP1-201ENST00000598702 760 ntBASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 AP001160.3-201ENST00000601484 763 ntBASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRAPPC1Q9Y5R8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAPPC1Q9Y5R8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAPPC1Q9Y5R8 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAPPC1Q9Y5R8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAPPC1Q9Y5R8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAPPC1Q9Y5R8 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAPPC1Q9Y5R8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAPPC1Q9Y5R8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAPPC1Q9Y5R8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.79□□□□□ -0.2
TRAPPC1Q9Y5R8 AC012354.3-201ENST00000623734 483 ntBASIC13.79□□□□□ -0.2
TRAPPC1Q9Y5R8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC13.79□□□□□ -0.2
TRAPPC1Q9Y5R8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAPPC1Q9Y5R8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAPPC1Q9Y5R8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.79□□□□□ -0.2
TRAPPC1Q9Y5R8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAPPC1Q9Y5R8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAPPC1Q9Y5R8 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAPPC1Q9Y5R8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAPPC1Q9Y5R8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms