Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 Z99916.3-201ENST00000623422 1080 ntBASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB3Q9Y5E6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 SPDYE15P-201ENST00000424157 909 ntBASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 HYMAI.1-201ENST00000620949 238 ntBASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 AL109659.2-201ENST00000606809 1674 ntBASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.82■□□□□ 0.44
PCDHB3Q9Y5E6 LINC01311-201ENST00000565162 1445 ntBASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 HCG11-201ENST00000411553 5696 ntBASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 AL450487.1-201ENST00000426799 995 ntBASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB3Q9Y5E6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms