Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 NUS1P2-201ENST00000417358 873 ntBASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 MTCL1P1-201ENST00000446207 792 ntBASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 BNIP3P18-201ENST00000593976 575 ntBASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB8Q9UN66 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 AC005336.2-201ENST00000593183 939 ntBASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDHB8Q9UN66 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 AC073592.3-201ENST00000625118 1834 ntBASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB8Q9UN66 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB8Q9UN66 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB8Q9UN66 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB8Q9UN66 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB8Q9UN66 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHB8Q9UN66 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB8Q9UN66 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB8Q9UN66 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB8Q9UN66 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB8Q9UN66 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
PCDHB8Q9UN66 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB8Q9UN66 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms