Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
UBQLN1Q9UMX0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
UBQLN1Q9UMX0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBQLN1Q9UMX0 AC093010.1-201ENST00000473625 1624 ntBASIC19.47■□□□□ 0.71
UBQLN1Q9UMX0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 AC132938.6-201ENST00000623828 1655 ntBASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 NSUN5P1-202ENST00000421140 1535 ntBASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 NSUN5P2-203ENST00000457352 1529 ntBASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBQLN1Q9UMX0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.7
UBQLN1Q9UMX0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN1Q9UMX0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 AC099336.1-202ENST00000602961 463 ntBASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.44■□□□□ 0.7
UBQLN1Q9UMX0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 MINOS1P3-201ENST00000457048 203 ntBASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 FOSL1P1-201ENST00000511041 816 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms