Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 AL691432.3-201ENST00000621860 400 ntBASIC17.09■□□□□ 0.33
CTSFQ9UBX1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSFQ9UBX1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTSFQ9UBX1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTSFQ9UBX1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CTSFQ9UBX1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTSFQ9UBX1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CTSFQ9UBX1 AC138932.1-201ENST00000534164 6830 ntBASIC17.08■□□□□ 0.33
CTSFQ9UBX1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
CTSFQ9UBX1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CTSFQ9UBX1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.08■□□□□ 0.33
CTSFQ9UBX1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTSFQ9UBX1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTSFQ9UBX1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CTSFQ9UBX1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CTSFQ9UBX1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.08■□□□□ 0.32
CTSFQ9UBX1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.08■□□□□ 0.32
CTSFQ9UBX1 TSPY12P-201ENST00000421279 868 ntBASIC17.08■□□□□ 0.32
CTSFQ9UBX1 KRT17P6-201ENST00000453795 1220 ntBASIC17.08■□□□□ 0.32
CTSFQ9UBX1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.08■□□□□ 0.32
CTSFQ9UBX1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CTSFQ9UBX1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.08■□□□□ 0.32
CTSFQ9UBX1 AC138894.3-201ENST00000603787 634 ntBASIC17.08■□□□□ 0.32
CTSFQ9UBX1 AL732292.2-201ENST00000609649 430 ntBASIC17.08■□□□□ 0.32
CTSFQ9UBX1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.08■□□□□ 0.32
CTSFQ9UBX1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.08■□□□□ 0.32
CTSFQ9UBX1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CTSFQ9UBX1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTSFQ9UBX1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTSFQ9UBX1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.08■□□□□ 0.32
CTSFQ9UBX1 TNXA-203ENST00000507684 2038 ntBASIC17.08■□□□□ 0.32
CTSFQ9UBX1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTSFQ9UBX1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 VENTXP7-201ENST00000475503 772 ntBASIC17.07■□□□□ 0.32
CTSFQ9UBX1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.07■□□□□ 0.32
CTSFQ9UBX1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSFQ9UBX1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 GMCL1P1-201ENST00000463439 1581 ntBASIC17.06■□□□□ 0.32
CTSFQ9UBX1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 ESPNP-201ENST00000270691 2015 ntBASIC17.06■□□□□ 0.32
CTSFQ9UBX1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 AC093503.3-201ENST00000624917 2352 ntBASIC17.06■□□□□ 0.32
CTSFQ9UBX1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 UNC93B7-201ENST00000509439 705 ntBASIC17.06■□□□□ 0.32
CTSFQ9UBX1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 AC011840.4-201ENST00000578471 627 ntBASIC17.06■□□□□ 0.32
CTSFQ9UBX1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 AC099336.1-202ENST00000602961 463 ntBASIC17.06■□□□□ 0.32
CTSFQ9UBX1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSFQ9UBX1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms