Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 IER3-202ENST00000376377 1350 ntBASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 LINC01311-201ENST00000565162 1445 ntBASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 BICD1-207ENST00000551848 1962 ntBASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 AC093677.2-201ENST00000600169 1863 ntBASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 SPDYE13P-201ENST00000445314 798 ntBASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CUEDC1Q9NWM3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.58■□□□□ 0.41
CUEDC1Q9NWM3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
CUEDC1Q9NWM3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CUEDC1Q9NWM3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.58■□□□□ 0.4
CUEDC1Q9NWM3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CUEDC1Q9NWM3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CUEDC1Q9NWM3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CUEDC1Q9NWM3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CUEDC1Q9NWM3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.58■□□□□ 0.4
CUEDC1Q9NWM3 FAM86EP-206ENST00000510506 987 ntBASIC17.58■□□□□ 0.4
CUEDC1Q9NWM3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.58■□□□□ 0.4
CUEDC1Q9NWM3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CUEDC1Q9NWM3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
CUEDC1Q9NWM3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CUEDC1Q9NWM3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CUEDC1Q9NWM3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CUEDC1Q9NWM3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CUEDC1Q9NWM3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CUEDC1Q9NWM3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.58■□□□□ 0.4
CUEDC1Q9NWM3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CUEDC1Q9NWM3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 PHGDH-209ENST00000641074 1780 ntBASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CUEDC1Q9NWM3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CUEDC1Q9NWM3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CUEDC1Q9NWM3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CUEDC1Q9NWM3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CUEDC1Q9NWM3 AC135050.7-201ENST00000624508 2218 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms