Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOMER3Q9NSC5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HOMER3Q9NSC5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 KRT18P55-202ENST00000578578 1546 ntBASIC18.95■□□□□ 0.62
HOMER3Q9NSC5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 AC093010.1-201ENST00000473625 1624 ntBASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 FAM201B-201ENST00000458407 597 ntBASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 MIR4651-201ENST00000582622 73 ntBASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HOMER3Q9NSC5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms