Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRD9Q9H8M2 AC009102.3-201ENST00000623118 1491 ntBASIC18.75■□□□□ 0.59
BRD9Q9H8M2 TP73-AS1-210ENST00000637775 1455 ntBASIC18.75■□□□□ 0.59
BRD9Q9H8M2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRD9Q9H8M2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRD9Q9H8M2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRD9Q9H8M2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 AC243591.1-201ENST00000452967 1364 ntBASIC18.74■□□□□ 0.59
BRD9Q9H8M2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 AC092865.5-201ENST00000545435 363 ntBASIC18.74■□□□□ 0.59
BRD9Q9H8M2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 AL355877.3-201ENST00000622820 899 ntBASIC18.74■□□□□ 0.59
BRD9Q9H8M2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRD9Q9H8M2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 AC018712.1-201ENST00000455767 687 ntBASIC18.73■□□□□ 0.59
BRD9Q9H8M2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 AC106730.1-201ENST00000566722 1090 ntBASIC18.73■□□□□ 0.59
BRD9Q9H8M2 AC139887.3-201ENST00000568585 713 ntBASIC18.73■□□□□ 0.59
BRD9Q9H8M2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BRD9Q9H8M2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 POLD2P1-201ENST00000511220 997 ntBASIC18.72■□□□□ 0.59
BRD9Q9H8M2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 AC005336.2-201ENST00000593183 939 ntBASIC18.72■□□□□ 0.59
BRD9Q9H8M2 MTDHP3-201ENST00000594186 672 ntBASIC18.72■□□□□ 0.59
BRD9Q9H8M2 TERC-201ENST00000602385 541 ntBASIC18.72■□□□□ 0.59
BRD9Q9H8M2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 AC099343.3-201ENST00000605834 2503 ntBASIC18.72■□□□□ 0.59
BRD9Q9H8M2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 AC112777.1-201ENST00000540175 1423 ntBASIC18.72■□□□□ 0.59
BRD9Q9H8M2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BRD9Q9H8M2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms