Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 BICD1-207ENST00000551848 1962 ntBASIC21.41■■□□□ 1.02
RNF41Q9H4P4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RNF41Q9H4P4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 AC132938.6-201ENST00000623828 1655 ntBASIC21.4■■□□□ 1.02
RNF41Q9H4P4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF41Q9H4P4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
RNF41Q9H4P4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
RNF41Q9H4P4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.39■■□□□ 1.02
RNF41Q9H4P4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF41Q9H4P4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF41Q9H4P4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.39■■□□□ 1.02
RNF41Q9H4P4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF41Q9H4P4 HCG11-201ENST00000411553 5696 ntBASIC21.39■■□□□ 1.01
RNF41Q9H4P4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF41Q9H4P4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF41Q9H4P4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.39■■□□□ 1.01
RNF41Q9H4P4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF41Q9H4P4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF41Q9H4P4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.39■■□□□ 1.01
RNF41Q9H4P4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.39■■□□□ 1.01
RNF41Q9H4P4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RNF41Q9H4P4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF41Q9H4P4 IGHV3-41-201ENST00000613121 348 ntBASIC21.39■■□□□ 1.01
RNF41Q9H4P4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF41Q9H4P4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF41Q9H4P4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF41Q9H4P4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF41Q9H4P4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF41Q9H4P4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF41Q9H4P4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
RNF41Q9H4P4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF41Q9H4P4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 DUTP2-201ENST00000519164 463 ntBASIC21.38■■□□□ 1.01
RNF41Q9H4P4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF41Q9H4P4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms