Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-2Q9C056 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
NKX6-2Q9C056 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-2Q9C056 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-2Q9C056 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-2Q9C056 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-2Q9C056 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-2Q9C056 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-2Q9C056 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX6-2Q9C056 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.76□□□□□ -0.05
NKX6-2Q9C056 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 AC004854.2-201ENST00000608450 1441 ntBASIC14.75□□□□□ -0.05
NKX6-2Q9C056 AC132872.4-202ENST00000622924 2756 ntBASIC14.75□□□□□ -0.05
NKX6-2Q9C056 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NKX6-2Q9C056 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 AC106886.4-201ENST00000623557 2502 ntBASIC14.74□□□□□ -0.05
NKX6-2Q9C056 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 AGGF1P2-201ENST00000426656 2106 ntBASIC14.74□□□□□ -0.05
NKX6-2Q9C056 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 RARRES2P4-201ENST00000514074 484 ntBASIC14.74□□□□□ -0.05
NKX6-2Q9C056 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NKX6-2Q9C056 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-2Q9C056 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX6-2Q9C056 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
NKX6-2Q9C056 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX6-2Q9C056 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NKX6-2Q9C056 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NKX6-2Q9C056 AC026691.1-201ENST00000602502 2017 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms