Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXB1Q99853 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXB1Q99853 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXB1Q99853 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXB1Q99853 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXB1Q99853 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXB1Q99853 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
FOXB1Q99853 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXB1Q99853 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
FOXB1Q99853 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXB1Q99853 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXB1Q99853 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
FOXB1Q99853 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXB1Q99853 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXB1Q99853 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXB1Q99853 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXB1Q99853 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16■□□□□ 0.15
FOXB1Q99853 KRT18P48-201ENST00000434763 852 ntBASIC16■□□□□ 0.15
FOXB1Q99853 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16■□□□□ 0.15
FOXB1Q99853 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16■□□□□ 0.15
FOXB1Q99853 NME3-204ENST00000563498 920 ntTSL 2 BASIC16■□□□□ 0.15
FOXB1Q99853 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16■□□□□ 0.15
FOXB1Q99853 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16■□□□□ 0.15
FOXB1Q99853 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16■□□□□ 0.15
FOXB1Q99853 TK1-205ENST00000590862 642 ntTSL 3 BASIC16■□□□□ 0.15
FOXB1Q99853 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16■□□□□ 0.15
FOXB1Q99853 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
FOXB1Q99853 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16■□□□□ 0.15
FOXB1Q99853 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16■□□□□ 0.15
FOXB1Q99853 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16■□□□□ 0.15
FOXB1Q99853 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
FOXB1Q99853 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXB1Q99853 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16■□□□□ 0.15
FOXB1Q99853 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXB1Q99853 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXB1Q99853 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXB1Q99853 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
FOXB1Q99853 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
FOXB1Q99853 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
FOXB1Q99853 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXB1Q99853 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXB1Q99853 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16■□□□□ 0.15
FOXB1Q99853 REXO1L9P-201ENST00000604264 2108 ntBASIC16■□□□□ 0.15
FOXB1Q99853 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
FOXB1Q99853 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
FOXB1Q99853 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXB1Q99853 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.99■□□□□ 0.15
FOXB1Q99853 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXB1Q99853 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXB1Q99853 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
FOXB1Q99853 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXB1Q99853 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
FOXB1Q99853 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.99■□□□□ 0.15
FOXB1Q99853 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.99■□□□□ 0.15
FOXB1Q99853 ZNF444P1-201ENST00000559497 298 ntBASIC15.99■□□□□ 0.15
FOXB1Q99853 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.99■□□□□ 0.15
FOXB1Q99853 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
FOXB1Q99853 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.99■□□□□ 0.15
FOXB1Q99853 AL590326.2-201ENST00000625139 305 ntBASIC15.99■□□□□ 0.15
FOXB1Q99853 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.99■□□□□ 0.15
FOXB1Q99853 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
FOXB1Q99853 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
FOXB1Q99853 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXB1Q99853 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
FOXB1Q99853 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXB1Q99853 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXB1Q99853 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.99■□□□□ 0.15
FOXB1Q99853 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
FOXB1Q99853 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.99■□□□□ 0.15
FOXB1Q99853 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXB1Q99853 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
FOXB1Q99853 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.98■□□□□ 0.15
FOXB1Q99853 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
FOXB1Q99853 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FOXB1Q99853 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
FOXB1Q99853 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FOXB1Q99853 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.98■□□□□ 0.15
FOXB1Q99853 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms