Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 PCDHB17P-201ENST00000539533 2393 ntBASIC12.11□□□□□ -0.47
LITAFQ99732 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
LITAFQ99732 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LITAFQ99732 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LITAFQ99732 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.1□□□□□ -0.47
LITAFQ99732 ANKRD26P3-201ENST00000454044 2748 ntBASIC12.1□□□□□ -0.47
LITAFQ99732 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LITAFQ99732 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
LITAFQ99732 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.1□□□□□ -0.47
LITAFQ99732 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
LITAFQ99732 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC12.1□□□□□ -0.47
LITAFQ99732 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 AC026691.1-201ENST00000602502 2017 ntBASIC12.1□□□□□ -0.47
LITAFQ99732 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LITAFQ99732 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LITAFQ99732 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC12.1□□□□□ -0.47
LITAFQ99732 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC12.1□□□□□ -0.47
LITAFQ99732 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 PLD4-205ENST00000553861 667 ntTSL 2 BASIC12.1□□□□□ -0.47
LITAFQ99732 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
LITAFQ99732 PARP1-210ENST00000629232 477 ntTSL 5 BASIC12.1□□□□□ -0.47
LITAFQ99732 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.1□□□□□ -0.47
LITAFQ99732 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
LITAFQ99732 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.1□□□□□ -0.47
LITAFQ99732 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.1□□□□□ -0.47
LITAFQ99732 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.1□□□□□ -0.47
LITAFQ99732 LINC00304-203ENST00000565008 1864 ntBASIC12.1□□□□□ -0.47
LITAFQ99732 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC12.1□□□□□ -0.47
LITAFQ99732 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.1□□□□□ -0.47
LITAFQ99732 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
LITAFQ99732 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.1□□□□□ -0.47
LITAFQ99732 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LITAFQ99732 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LITAFQ99732 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
LITAFQ99732 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
LITAFQ99732 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
LITAFQ99732 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC12.09□□□□□ -0.47
LITAFQ99732 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC12.09□□□□□ -0.47
LITAFQ99732 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 AC011767.1-201ENST00000617410 1153 ntBASIC12.09□□□□□ -0.47
LITAFQ99732 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 AL121829.2-201ENST00000620908 328 ntBASIC12.09□□□□□ -0.47
LITAFQ99732 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12.09□□□□□ -0.47
LITAFQ99732 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.09□□□□□ -0.47
LITAFQ99732 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC12.09□□□□□ -0.47
LITAFQ99732 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
LITAFQ99732 OR6D1P-202ENST00000641007 5290 ntBASIC12.09□□□□□ -0.47
LITAFQ99732 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.09□□□□□ -0.47
LITAFQ99732 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
LITAFQ99732 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.09□□□□□ -0.47
LITAFQ99732 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
LITAFQ99732 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LITAFQ99732 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LITAFQ99732 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LITAFQ99732 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.08□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms