Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSPG4P5Q96PW8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.76■□□□□ 0.59
CSPG4P5Q96PW8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSPG4P5Q96PW8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSPG4P5Q96PW8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CSPG4P5Q96PW8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CSPG4P5Q96PW8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSPG4P5Q96PW8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 HOMER2P1-201ENST00000455653 964 ntBASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSPG4P5Q96PW8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 LINC00167-201ENST00000530583 1419 ntBASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 AL359075.1-203ENST00000462729 1002 ntBASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 AC024563.2-201ENST00000603282 481 ntBASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CSPG4P5Q96PW8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.73■□□□□ 0.59
CSPG4P5Q96PW8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CSPG4P5Q96PW8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CSPG4P5Q96PW8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CSPG4P5Q96PW8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CSPG4P5Q96PW8 KRT89P-201ENST00000620027 1478 ntBASIC18.72■□□□□ 0.59
CSPG4P5Q96PW8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.72■□□□□ 0.59
CSPG4P5Q96PW8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSPG4P5Q96PW8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CSPG4P5Q96PW8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSPG4P5Q96PW8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSPG4P5Q96PW8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSPG4P5Q96PW8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CSPG4P5Q96PW8 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.72■□□□□ 0.59
CSPG4P5Q96PW8 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.72■□□□□ 0.59
CSPG4P5Q96PW8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms