Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MS4A4EQ96PG1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 SLC25A6P5-201ENST00000435663 894 ntBASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 AC140113.3-201ENST00000605663 199 ntBASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 AC008764.6-201ENST00000595909 2069 ntBASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MS4A4EQ96PG1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
MS4A4EQ96PG1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 LINC01023-201ENST00000606054 436 ntBASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.96■□□□□ 0.31
MS4A4EQ96PG1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
MS4A4EQ96PG1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.96■□□□□ 0.3
MS4A4EQ96PG1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
MS4A4EQ96PG1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
MS4A4EQ96PG1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.96■□□□□ 0.3
MS4A4EQ96PG1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms