Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC009947.1-201ENST00000444350 727 ntBASIC15.38■□□□□ 0.05
SPG11Q96JI7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 AC068472.1-201ENST00000474589 881 ntBASIC15.38■□□□□ 0.05
SPG11Q96JI7 AL078644.1-201ENST00000609881 752 ntBASIC15.38■□□□□ 0.05
SPG11Q96JI7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SPG11Q96JI7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SPG11Q96JI7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SPG11Q96JI7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 AC125634.1-201ENST00000438758 1403 ntBASIC15.38■□□□□ 0.05
SPG11Q96JI7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPG11Q96JI7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPG11Q96JI7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SPG11Q96JI7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPG11Q96JI7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 FP475955.4-201ENST00000623131 1990 ntBASIC15.38■□□□□ 0.05
SPG11Q96JI7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SPG11Q96JI7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SPG11Q96JI7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SPG11Q96JI7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SPG11Q96JI7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SPG11Q96JI7 AC107918.4-202ENST00000641623 219 ntBASIC15.37■□□□□ 0.05
SPG11Q96JI7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SPG11Q96JI7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SPG11Q96JI7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SPG11Q96JI7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SPG11Q96JI7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SPG11Q96JI7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SPG11Q96JI7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SPG11Q96JI7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SPG11Q96JI7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SPG11Q96JI7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SPG11Q96JI7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SPG11Q96JI7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SPG11Q96JI7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SPG11Q96JI7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SPG11Q96JI7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
SPG11Q96JI7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SPG11Q96JI7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
SPG11Q96JI7 AC011467.2-201ENST00000598425 242 ntBASIC15.36■□□□□ 0.05
SPG11Q96JI7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SPG11Q96JI7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
SPG11Q96JI7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
SPG11Q96JI7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SPG11Q96JI7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SPG11Q96JI7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
SPG11Q96JI7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.36■□□□□ 0.05
SPG11Q96JI7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
SPG11Q96JI7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SPG11Q96JI7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SPG11Q96JI7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SPG11Q96JI7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
SPG11Q96JI7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.36■□□□□ 0.05
SPG11Q96JI7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.36■□□□□ 0.05
SPG11Q96JI7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.36■□□□□ 0.05
SPG11Q96JI7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.36■□□□□ 0.05
SPG11Q96JI7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SPG11Q96JI7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SPG11Q96JI7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SPG11Q96JI7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.36■□□□□ 0.05
SPG11Q96JI7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SPG11Q96JI7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.35■□□□□ 0.05
SPG11Q96JI7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.35■□□□□ 0.05
SPG11Q96JI7 AC254562.1-201ENST00000417586 456 ntBASIC15.35■□□□□ 0.05
SPG11Q96JI7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms