Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 AC130371.2-201ENST00000619443 611 ntBASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC47A1Q96FL8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 PHGDH-209ENST00000641074 1780 ntBASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 FAM207BP-201ENST00000447172 505 ntBASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 AC142381.4-202ENST00000563973 229 ntBASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 MIR6786-201ENST00000616843 113 ntBASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC47A1Q96FL8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 AP000593.1-201ENST00000393668 712 ntBASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 CKBP1-201ENST00000565489 1086 ntBASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 FSCN1P1-201ENST00000568912 1481 ntBASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SLC47A1Q96FL8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC47A1Q96FL8 AC006116.8-202ENST00000587620 1550 ntBASIC17.15■□□□□ 0.34
SLC47A1Q96FL8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
SLC47A1Q96FL8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
SLC47A1Q96FL8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms