Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SHC3Q92529 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC3Q92529 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SHC3Q92529 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
SHC3Q92529 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.4■□□□□ 0.7
SHC3Q92529 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC3Q92529 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SHC3Q92529 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC3Q92529 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC3Q92529 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC3Q92529 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.4■□□□□ 0.7
SHC3Q92529 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SHC3Q92529 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHC3Q92529 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
SHC3Q92529 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SHC3Q92529 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SHC3Q92529 AC005332.8-201ENST00000622750 2735 ntBASIC19.39■□□□□ 0.7
SHC3Q92529 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.39■□□□□ 0.69
SHC3Q92529 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 TSPY5P-201ENST00000426936 936 ntBASIC19.39■□□□□ 0.69
SHC3Q92529 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.39■□□□□ 0.69
SHC3Q92529 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SHC3Q92529 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.39■□□□□ 0.69
SHC3Q92529 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHC3Q92529 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SHC3Q92529 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SHC3Q92529 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC3Q92529 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
SHC3Q92529 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHC3Q92529 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC3Q92529 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC3Q92529 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC3Q92529 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC3Q92529 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC3Q92529 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC3Q92529 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHC3Q92529 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SHC3Q92529 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC3Q92529 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHC3Q92529 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHC3Q92529 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.38■□□□□ 0.69
SHC3Q92529 KRT18P38-201ENST00000449496 1282 ntBASIC19.38■□□□□ 0.69
SHC3Q92529 AC092597.1-201ENST00000487352 616 ntBASIC19.38■□□□□ 0.69
SHC3Q92529 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.38■□□□□ 0.69
SHC3Q92529 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHC3Q92529 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.38■□□□□ 0.69
SHC3Q92529 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHC3Q92529 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.38■□□□□ 0.69
SHC3Q92529 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SHC3Q92529 AC134043.2-201ENST00000624206 2238 ntBASIC19.38■□□□□ 0.69
SHC3Q92529 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 LINC00602-201ENST00000629776 2065 ntBASIC19.37■□□□□ 0.69
SHC3Q92529 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.37■□□□□ 0.69
SHC3Q92529 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.37■□□□□ 0.69
SHC3Q92529 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.37■□□□□ 0.69
SHC3Q92529 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.37■□□□□ 0.69
SHC3Q92529 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.37■□□□□ 0.69
SHC3Q92529 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SHC3Q92529 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.37■□□□□ 0.69
SHC3Q92529 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.37■□□□□ 0.69
SHC3Q92529 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHC3Q92529 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms