Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF139Q8WU17 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF139Q8WU17 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF139Q8WU17 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF139Q8WU17 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF139Q8WU17 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF139Q8WU17 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF139Q8WU17 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF139Q8WU17 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF139Q8WU17 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF139Q8WU17 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF139Q8WU17 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF139Q8WU17 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF139Q8WU17 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF139Q8WU17 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
RNF139Q8WU17 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
RNF139Q8WU17 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF139Q8WU17 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF139Q8WU17 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF139Q8WU17 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF139Q8WU17 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF139Q8WU17 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF139Q8WU17 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF139Q8WU17 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF139Q8WU17 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF139Q8WU17 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF139Q8WU17 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RNF139Q8WU17 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.08■□□□□ 0.64
RNF139Q8WU17 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.08■□□□□ 0.64
RNF139Q8WU17 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF139Q8WU17 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF139Q8WU17 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
RNF139Q8WU17 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF139Q8WU17 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF139Q8WU17 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RNF139Q8WU17 KRT89P-201ENST00000620027 1478 ntBASIC19.08■□□□□ 0.64
RNF139Q8WU17 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF139Q8WU17 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF139Q8WU17 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF139Q8WU17 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF139Q8WU17 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF139Q8WU17 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF139Q8WU17 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF139Q8WU17 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF139Q8WU17 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 GMCL1P1-201ENST00000463439 1581 ntBASIC19.07■□□□□ 0.64
RNF139Q8WU17 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF139Q8WU17 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF139Q8WU17 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF139Q8WU17 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF139Q8WU17 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF139Q8WU17 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF139Q8WU17 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF139Q8WU17 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF139Q8WU17 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF139Q8WU17 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF139Q8WU17 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RNF139Q8WU17 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF139Q8WU17 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF139Q8WU17 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RNF139Q8WU17 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms