Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 RASA4DP-201ENST00000460726 1199 ntBASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 AC010240.3-201ENST00000607688 395 ntBASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMARCC2Q8TAQ2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMARCC2Q8TAQ2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.29■■□□□ 1
SMARCC2Q8TAQ2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.28■■□□□ 1
SMARCC2Q8TAQ2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 AP000997.3-201ENST00000623333 2250 ntBASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.27■■□□□ 1
SMARCC2Q8TAQ2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms