Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC22.69■■□□□ 1.22
LINS1Q8NG48 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LINS1Q8NG48 DUTP2-201ENST00000519164 463 ntBASIC22.69■■□□□ 1.22
LINS1Q8NG48 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC22.69■■□□□ 1.22
LINS1Q8NG48 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC22.69■■□□□ 1.22
LINS1Q8NG48 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LINS1Q8NG48 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC22.69■■□□□ 1.22
LINS1Q8NG48 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC22.69■■□□□ 1.22
LINS1Q8NG48 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
LINS1Q8NG48 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LINS1Q8NG48 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC22.69■■□□□ 1.22
LINS1Q8NG48 AL096828.2-201ENST00000567259 1965 ntBASIC22.69■■□□□ 1.22
LINS1Q8NG48 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
LINS1Q8NG48 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LINS1Q8NG48 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LINS1Q8NG48 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC22.68■■□□□ 1.22
LINS1Q8NG48 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LINS1Q8NG48 AC125634.1-201ENST00000438758 1403 ntBASIC22.68■■□□□ 1.22
LINS1Q8NG48 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LINS1Q8NG48 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC22.68■■□□□ 1.22
LINS1Q8NG48 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LINS1Q8NG48 TPM4P1-201ENST00000436100 807 ntBASIC22.68■■□□□ 1.22
LINS1Q8NG48 KRT16P4-201ENST00000453883 522 ntBASIC22.68■■□□□ 1.22
LINS1Q8NG48 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC22.68■■□□□ 1.22
LINS1Q8NG48 AC090164.3-201ENST00000610780 2143 ntBASIC22.68■■□□□ 1.22
LINS1Q8NG48 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
LINS1Q8NG48 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LINS1Q8NG48 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.68■■□□□ 1.22
LINS1Q8NG48 POR-209ENST00000439269 1858 ntTSL 2 BASIC22.68■■□□□ 1.22
LINS1Q8NG48 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LINS1Q8NG48 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC22.68■■□□□ 1.22
LINS1Q8NG48 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC22.68■■□□□ 1.22
LINS1Q8NG48 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LINS1Q8NG48 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC22.67■■□□□ 1.22
LINS1Q8NG48 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LINS1Q8NG48 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
LINS1Q8NG48 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LINS1Q8NG48 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LINS1Q8NG48 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LINS1Q8NG48 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LINS1Q8NG48 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
LINS1Q8NG48 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
LINS1Q8NG48 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC22.67■■□□□ 1.22
LINS1Q8NG48 MEG3-211ENST00000452514 461 ntTSL 3 BASIC22.67■■□□□ 1.22
LINS1Q8NG48 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC22.67■■□□□ 1.22
LINS1Q8NG48 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LINS1Q8NG48 IGHV3OR16-7-201ENST00000604106 360 ntBASIC22.67■■□□□ 1.22
LINS1Q8NG48 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC22.67■■□□□ 1.22
LINS1Q8NG48 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LINS1Q8NG48 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LINS1Q8NG48 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LINS1Q8NG48 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LINS1Q8NG48 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
LINS1Q8NG48 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LINS1Q8NG48 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
LINS1Q8NG48 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LINS1Q8NG48 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
LINS1Q8NG48 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LINS1Q8NG48 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LINS1Q8NG48 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LINS1Q8NG48 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
LINS1Q8NG48 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC22.66■■□□□ 1.22
LINS1Q8NG48 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
LINS1Q8NG48 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LINS1Q8NG48 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC22.66■■□□□ 1.22
LINS1Q8NG48 NUS1P2-201ENST00000417358 873 ntBASIC22.66■■□□□ 1.22
LINS1Q8NG48 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LINS1Q8NG48 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC22.66■■□□□ 1.22
LINS1Q8NG48 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC22.66■■□□□ 1.22
LINS1Q8NG48 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LINS1Q8NG48 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC22.66■■□□□ 1.22
LINS1Q8NG48 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC22.66■■□□□ 1.22
LINS1Q8NG48 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LINS1Q8NG48 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LINS1Q8NG48 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LINS1Q8NG48 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LINS1Q8NG48 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
LINS1Q8NG48 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
LINS1Q8NG48 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LINS1Q8NG48 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LINS1Q8NG48 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LINS1Q8NG48 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
LINS1Q8NG48 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LINS1Q8NG48 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LINS1Q8NG48 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LINS1Q8NG48 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LINS1Q8NG48 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LINS1Q8NG48 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LINS1Q8NG48 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LINS1Q8NG48 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
LINS1Q8NG48 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LINS1Q8NG48 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.65■■□□□ 1.22
LINS1Q8NG48 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
LINS1Q8NG48 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC22.65■■□□□ 1.22
LINS1Q8NG48 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LINS1Q8NG48 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LINS1Q8NG48 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
LINS1Q8NG48 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC22.65■■□□□ 1.22
LINS1Q8NG48 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC22.65■■□□□ 1.22
LINS1Q8NG48 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms