Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 TSPY12P-201ENST00000421279 868 ntBASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 ABALON-201ENST00000629058 1903 ntBASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 ATP5G2P1-201ENST00000433580 426 ntBASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 MIR3180-1-201ENST00000580374 94 ntBASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 AC090616.6-201ENST00000582640 721 ntBASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 MIR3180-3-201ENST00000584616 94 ntBASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 AL592071.1-201ENST00000611956 408 ntBASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.46■□□□□ 0.39
LINC01555Q8NAE3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LINC01555Q8NAE3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.46■□□□□ 0.38
LINC01555Q8NAE3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 AL845331.1-201ENST00000424978 1190 ntBASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 KRT18P65-201ENST00000439811 1286 ntBASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 AP002414.4-201ENST00000589764 1148 ntBASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 AC009154.2-201ENST00000621177 724 ntBASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.45■□□□□ 0.38
LINC01555Q8NAE3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
LINC01555Q8NAE3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms