Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRIML2Q8N7C3 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.62■□□□□ 0.41
TRIML2Q8N7C3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIML2Q8N7C3 AL357033.4-201ENST00000617703 1807 ntBASIC17.62■□□□□ 0.41
TRIML2Q8N7C3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIML2Q8N7C3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIML2Q8N7C3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIML2Q8N7C3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIML2Q8N7C3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIML2Q8N7C3 KRT8P45-201ENST00000414328 1447 ntBASIC17.62■□□□□ 0.41
TRIML2Q8N7C3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIML2Q8N7C3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRIML2Q8N7C3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIML2Q8N7C3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIML2Q8N7C3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIML2Q8N7C3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIML2Q8N7C3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 AF186192.3-201ENST00000583427 947 ntBASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 AC012317.2-201ENST00000623305 2251 ntBASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIML2Q8N7C3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 RPPH1-201ENST00000516869 333 ntBASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 RCC2P3-201ENST00000418112 1537 ntBASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 AL499627.1-201ENST00000569373 2188 ntBASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIML2Q8N7C3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIML2Q8N7C3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIML2Q8N7C3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.59■□□□□ 0.41
TRIML2Q8N7C3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIML2Q8N7C3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIML2Q8N7C3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIML2Q8N7C3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIML2Q8N7C3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRIML2Q8N7C3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIML2Q8N7C3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIML2Q8N7C3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIML2Q8N7C3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIML2Q8N7C3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms