Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC26.79■■□□□ 1.88
ABCA6Q8N139 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ABCA6Q8N139 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ABCA6Q8N139 AL499627.1-201ENST00000569373 2188 ntBASIC26.79■■□□□ 1.88
ABCA6Q8N139 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC26.79■■□□□ 1.88
ABCA6Q8N139 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC26.79■■□□□ 1.88
ABCA6Q8N139 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
ABCA6Q8N139 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
ABCA6Q8N139 WDR53-203ENST00000429115 683 ntTSL 2 BASIC26.79■■□□□ 1.88
ABCA6Q8N139 LHX6-205ENST00000464484 666 ntTSL 2 BASIC26.79■■□□□ 1.88
ABCA6Q8N139 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC26.79■■□□□ 1.88
ABCA6Q8N139 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC26.79■■□□□ 1.88
ABCA6Q8N139 AP002472.1-201ENST00000577490 586 ntBASIC26.79■■□□□ 1.88
ABCA6Q8N139 MIR4751-201ENST00000578027 74 ntBASIC26.79■■□□□ 1.88
ABCA6Q8N139 AC011467.4-201ENST00000594891 528 ntBASIC26.79■■□□□ 1.88
ABCA6Q8N139 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ABCA6Q8N139 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ABCA6Q8N139 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ABCA6Q8N139 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ABCA6Q8N139 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC26.78■■□□□ 1.88
ABCA6Q8N139 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ABCA6Q8N139 AC132938.6-201ENST00000623828 1655 ntBASIC26.78■■□□□ 1.88
ABCA6Q8N139 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ABCA6Q8N139 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ABCA6Q8N139 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC26.78■■□□□ 1.88
ABCA6Q8N139 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
ABCA6Q8N139 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC26.78■■□□□ 1.88
ABCA6Q8N139 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
ABCA6Q8N139 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
ABCA6Q8N139 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ABCA6Q8N139 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC26.78■■□□□ 1.88
ABCA6Q8N139 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
ABCA6Q8N139 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
ABCA6Q8N139 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA6Q8N139 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC26.77■■□□□ 1.88
ABCA6Q8N139 AL161938.1-201ENST00000569833 2180 ntBASIC26.77■■□□□ 1.88
ABCA6Q8N139 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
ABCA6Q8N139 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA6Q8N139 ADM-208ENST00000534464 1640 ntTSL 2 BASIC26.77■■□□□ 1.88
ABCA6Q8N139 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA6Q8N139 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA6Q8N139 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA6Q8N139 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA6Q8N139 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA6Q8N139 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA6Q8N139 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA6Q8N139 TSEN15P1-201ENST00000423257 515 ntBASIC26.77■■□□□ 1.88
ABCA6Q8N139 AC010507.1-201ENST00000633895 436 ntBASIC26.77■■□□□ 1.88
ABCA6Q8N139 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA6Q8N139 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA6Q8N139 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC26.77■■□□□ 1.88
ABCA6Q8N139 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA6Q8N139 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ABCA6Q8N139 AC006504.4-201ENST00000592118 1568 ntBASIC26.77■■□□□ 1.88
ABCA6Q8N139 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
ABCA6Q8N139 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ABCA6Q8N139 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
ABCA6Q8N139 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ABCA6Q8N139 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC26.76■■□□□ 1.87
ABCA6Q8N139 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC26.76■■□□□ 1.87
ABCA6Q8N139 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC26.76■■□□□ 1.87
ABCA6Q8N139 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
ABCA6Q8N139 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
ABCA6Q8N139 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC26.76■■□□□ 1.87
ABCA6Q8N139 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC26.76■■□□□ 1.87
ABCA6Q8N139 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
ABCA6Q8N139 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC26.76■■□□□ 1.87
ABCA6Q8N139 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ABCA6Q8N139 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ABCA6Q8N139 GOLGA6L17P-202ENST00000614358 1398 ntBASIC26.76■■□□□ 1.87
ABCA6Q8N139 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ABCA6Q8N139 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
ABCA6Q8N139 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ABCA6Q8N139 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ABCA6Q8N139 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ABCA6Q8N139 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC26.76■■□□□ 1.87
ABCA6Q8N139 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC26.76■■□□□ 1.87
ABCA6Q8N139 AC093028.1-201ENST00000622998 982 ntBASIC26.76■■□□□ 1.87
ABCA6Q8N139 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
ABCA6Q8N139 ME2-218ENST00000640965 2476 ntTSL 5 BASIC26.75■■□□□ 1.87
ABCA6Q8N139 AL049812.1-201ENST00000432563 2267 ntBASIC26.75■■□□□ 1.87
ABCA6Q8N139 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC26.75■■□□□ 1.87
ABCA6Q8N139 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
ABCA6Q8N139 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC26.75■■□□□ 1.87
ABCA6Q8N139 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC26.75■■□□□ 1.87
ABCA6Q8N139 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ABCA6Q8N139 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC26.75■■□□□ 1.87
ABCA6Q8N139 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
ABCA6Q8N139 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
ABCA6Q8N139 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC26.75■■□□□ 1.87
ABCA6Q8N139 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC26.75■■□□□ 1.87
ABCA6Q8N139 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
ABCA6Q8N139 CD82-202ENST00000342935 967 ntTSL 5 BASIC26.75■■□□□ 1.87
ABCA6Q8N139 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC26.75■■□□□ 1.87
ABCA6Q8N139 AC096633.1-201ENST00000422446 749 ntBASIC26.75■■□□□ 1.87
ABCA6Q8N139 AC122714.2-201ENST00000502787 707 ntBASIC26.75■■□□□ 1.87
ABCA6Q8N139 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC26.75■■□□□ 1.87
ABCA6Q8N139 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
ABCA6Q8N139 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC26.75■■□□□ 1.87
ABCA6Q8N139 RIN3-211ENST00000557762 517 ntTSL 3 BASIC26.75■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms