Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF220Q5VTB9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 Z85996.1-201ENST00000494644 937 ntBASIC17.55■□□□□ 0.4
RNF220Q5VTB9 CD99P1-205ENST00000527459 561 ntBASIC17.55■□□□□ 0.4
RNF220Q5VTB9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.55■□□□□ 0.4
RNF220Q5VTB9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNF220Q5VTB9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF220Q5VTB9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 NIFKP9-201ENST00000419265 221 ntBASIC17.53■□□□□ 0.4
RNF220Q5VTB9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 AC128676.1-201ENST00000454392 318 ntBASIC17.53■□□□□ 0.4
RNF220Q5VTB9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 AL353708.3-201ENST00000610272 989 ntBASIC17.53■□□□□ 0.4
RNF220Q5VTB9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 AC083906.6-201ENST00000641366 219 ntBASIC17.53■□□□□ 0.4
RNF220Q5VTB9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF220Q5VTB9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms