Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TMEM35AQ53FP2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM35AQ53FP2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM35AQ53FP2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM35AQ53FP2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM35AQ53FP2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM35AQ53FP2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM35AQ53FP2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TMEM35AQ53FP2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM35AQ53FP2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM35AQ53FP2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM35AQ53FP2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM35AQ53FP2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM35AQ53FP2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 HBZP1-201ENST00000354915 429 ntBASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 KRT18P48-201ENST00000434763 852 ntBASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 AC112907.2-201ENST00000448639 330 ntBASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 DUTP2-201ENST00000519164 463 ntBASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM35AQ53FP2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 MIR662-201ENST00000384847 95 ntBASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 KRT18P21-201ENST00000515767 1272 ntBASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 HYMAI.1-201ENST00000620949 238 ntBASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM35AQ53FP2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TMEM35AQ53FP2 LINC01311-201ENST00000565162 1445 ntBASIC17.27■□□□□ 0.35
TMEM35AQ53FP2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM35AQ53FP2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM35AQ53FP2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM35AQ53FP2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
TMEM35AQ53FP2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.27■□□□□ 0.35
TMEM35AQ53FP2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.27■□□□□ 0.35
TMEM35AQ53FP2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
TMEM35AQ53FP2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM35AQ53FP2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM35AQ53FP2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.27■□□□□ 0.35
TMEM35AQ53FP2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM35AQ53FP2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms