Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HLA-BQ31612 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-BQ31612 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-BQ31612 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-BQ31612 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-BQ31612 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-BQ31612 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-BQ31612 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-BQ31612 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-BQ31612 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-BQ31612 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-BQ31612 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-BQ31612 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-BQ31612 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-BQ31612 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.6■□□□□ 0.41
HLA-BQ31612 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-BQ31612 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-BQ31612 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-BQ31612 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-BQ31612 MIR3687-2-201ENST00000577708 61 ntBASIC17.6■□□□□ 0.41
HLA-BQ31612 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-BQ31612 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HLA-BQ31612 MIR3687-1-201ENST00000614492 61 ntBASIC17.6■□□□□ 0.41
HLA-BQ31612 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-BQ31612 AC107918.4-202ENST00000641623 219 ntBASIC17.6■□□□□ 0.41
HLA-BQ31612 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.6■□□□□ 0.41
HLA-BQ31612 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-BQ31612 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-BQ31612 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-BQ31612 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HLA-BQ31612 AL499627.1-201ENST00000569373 2188 ntBASIC17.6■□□□□ 0.41
HLA-BQ31612 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HLA-BQ31612 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-BQ31612 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-BQ31612 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-BQ31612 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-BQ31612 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
HLA-BQ31612 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-BQ31612 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-BQ31612 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-BQ31612 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-BQ31612 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-BQ31612 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-BQ31612 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-BQ31612 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-BQ31612 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HLA-BQ31612 GPX1P2-201ENST00000429271 606 ntBASIC17.59■□□□□ 0.41
HLA-BQ31612 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-BQ31612 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-BQ31612 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-BQ31612 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-BQ31612 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-BQ31612 UNC93B6-202ENST00000528242 690 ntBASIC17.59■□□□□ 0.41
HLA-BQ31612 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-BQ31612 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
HLA-BQ31612 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.59■□□□□ 0.41
HLA-BQ31612 AC040169.1-201ENST00000565382 521 ntBASIC17.59■□□□□ 0.41
HLA-BQ31612 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-BQ31612 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HLA-BQ31612 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-BQ31612 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-BQ31612 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-BQ31612 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-BQ31612 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-BQ31612 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-BQ31612 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-BQ31612 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-BQ31612 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
HLA-BQ31612 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.58■□□□□ 0.41
HLA-BQ31612 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
HLA-BQ31612 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-BQ31612 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
HLA-BQ31612 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-BQ31612 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.58■□□□□ 0.41
HLA-BQ31612 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
HLA-BQ31612 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-BQ31612 AP002414.3-201ENST00000589352 1468 ntBASIC17.58■□□□□ 0.41
HLA-BQ31612 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.58■□□□□ 0.4
HLA-BQ31612 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-BQ31612 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-BQ31612 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-BQ31612 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
HLA-BQ31612 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.58■□□□□ 0.4
HLA-BQ31612 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-BQ31612 YBX2P1-201ENST00000394192 760 ntBASIC17.58■□□□□ 0.4
HLA-BQ31612 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-BQ31612 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.58■□□□□ 0.4
HLA-BQ31612 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-BQ31612 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-BQ31612 AC112482.1-201ENST00000492080 688 ntBASIC17.58■□□□□ 0.4
HLA-BQ31612 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.58■□□□□ 0.4
HLA-BQ31612 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-BQ31612 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.58■□□□□ 0.4
HLA-BQ31612 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-BQ31612 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
HLA-BQ31612 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-BQ31612 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-BQ31612 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
HLA-BQ31612 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-BQ31612 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms