Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDR2Q01850 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDR2Q01850 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.4■□□□□ 0.7
CDR2Q01850 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
CDR2Q01850 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.4■□□□□ 0.7
CDR2Q01850 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDR2Q01850 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.4■□□□□ 0.7
CDR2Q01850 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.4■□□□□ 0.7
CDR2Q01850 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.4■□□□□ 0.7
CDR2Q01850 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.4■□□□□ 0.7
CDR2Q01850 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDR2Q01850 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.4■□□□□ 0.7
CDR2Q01850 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDR2Q01850 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDR2Q01850 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDR2Q01850 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDR2Q01850 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDR2Q01850 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CDR2Q01850 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDR2Q01850 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDR2Q01850 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.39■□□□□ 0.7
CDR2Q01850 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
CDR2Q01850 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.7
CDR2Q01850 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.39■□□□□ 0.7
CDR2Q01850 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.39■□□□□ 0.7
CDR2Q01850 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDR2Q01850 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CDR2Q01850 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
CDR2Q01850 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR2Q01850 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR2Q01850 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CDR2Q01850 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR2Q01850 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.39■□□□□ 0.69
CDR2Q01850 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDR2Q01850 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.39■□□□□ 0.69
CDR2Q01850 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.39■□□□□ 0.69
CDR2Q01850 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDR2Q01850 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.39■□□□□ 0.69
CDR2Q01850 AC012306.2-201ENST00000609350 630 ntBASIC19.39■□□□□ 0.69
CDR2Q01850 AL157888.1-201ENST00000631930 593 ntBASIC19.39■□□□□ 0.69
CDR2Q01850 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR2Q01850 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR2Q01850 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR2Q01850 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR2Q01850 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CDR2Q01850 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
CDR2Q01850 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.39■□□□□ 0.69
CDR2Q01850 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR2Q01850 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDR2Q01850 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDR2Q01850 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR2Q01850 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR2Q01850 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR2Q01850 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR2Q01850 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR2Q01850 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR2Q01850 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDR2Q01850 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CDR2Q01850 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CDR2Q01850 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR2Q01850 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDR2Q01850 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.38■□□□□ 0.69
CDR2Q01850 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.38■□□□□ 0.69
CDR2Q01850 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR2Q01850 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.38■□□□□ 0.69
CDR2Q01850 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDR2Q01850 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CDR2Q01850 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.38■□□□□ 0.69
CDR2Q01850 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CDR2Q01850 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.38■□□□□ 0.69
CDR2Q01850 AC010203.1-204ENST00000548782 407 ntBASIC19.38■□□□□ 0.69
CDR2Q01850 GCSHP2-201ENST00000560971 527 ntBASIC19.38■□□□□ 0.69
CDR2Q01850 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.38■□□□□ 0.69
CDR2Q01850 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR2Q01850 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDR2Q01850 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
CDR2Q01850 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDR2Q01850 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CDR2Q01850 AC073912.3-201ENST00000624414 853 ntBASIC19.38■□□□□ 0.69
CDR2Q01850 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CDR2Q01850 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR2Q01850 AC097493.4-201ENST00000641197 219 ntBASIC19.38■□□□□ 0.69
CDR2Q01850 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CDR2Q01850 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CDR2Q01850 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR2Q01850 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDR2Q01850 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDR2Q01850 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.37■□□□□ 0.69
CDR2Q01850 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CDR2Q01850 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDR2Q01850 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDR2Q01850 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDR2Q01850 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDR2Q01850 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CDR2Q01850 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDR2Q01850 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CDR2Q01850 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CDR2Q01850 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDR2Q01850 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.37■□□□□ 0.69
CDR2Q01850 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms