Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
ASIC1P78348 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ASIC1P78348 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ASIC1P78348 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 AC008764.6-201ENST00000595909 2069 ntBASIC20.31■□□□□ 0.84
ASIC1P78348 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ASIC1P78348 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.31■□□□□ 0.84
ASIC1P78348 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.31■□□□□ 0.84
ASIC1P78348 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.31■□□□□ 0.84
ASIC1P78348 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ASIC1P78348 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
ASIC1P78348 AC005363.2-201ENST00000618631 242 ntBASIC20.31■□□□□ 0.84
ASIC1P78348 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.31■□□□□ 0.84
ASIC1P78348 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ASIC1P78348 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.3■□□□□ 0.84
ASIC1P78348 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ASIC1P78348 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ASIC1P78348 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ASIC1P78348 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ASIC1P78348 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ASIC1P78348 AC005332.8-201ENST00000622750 2735 ntBASIC20.3■□□□□ 0.84
ASIC1P78348 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.3■□□□□ 0.84
ASIC1P78348 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ASIC1P78348 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ASIC1P78348 AC113347.1-201ENST00000413321 391 ntBASIC20.3■□□□□ 0.84
ASIC1P78348 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.3■□□□□ 0.84
ASIC1P78348 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
ASIC1P78348 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
ASIC1P78348 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.3■□□□□ 0.84
ASIC1P78348 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ASIC1P78348 FLJ13224-201ENST00000313737 1514 ntBASIC20.3■□□□□ 0.84
ASIC1P78348 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.3■□□□□ 0.84
ASIC1P78348 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ASIC1P78348 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ASIC1P78348 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ASIC1P78348 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ASIC1P78348 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ASIC1P78348 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.29■□□□□ 0.84
ASIC1P78348 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ASIC1P78348 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ASIC1P78348 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.29■□□□□ 0.84
ASIC1P78348 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.29■□□□□ 0.84
ASIC1P78348 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ASIC1P78348 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ASIC1P78348 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ASIC1P78348 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ASIC1P78348 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ASIC1P78348 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ASIC1P78348 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ASIC1P78348 AC093010.1-201ENST00000473625 1624 ntBASIC20.29■□□□□ 0.84
ASIC1P78348 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ASIC1P78348 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.29■□□□□ 0.84
ASIC1P78348 AL137013.1-201ENST00000432946 1228 ntBASIC20.29■□□□□ 0.84
ASIC1P78348 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.29■□□□□ 0.84
ASIC1P78348 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ASIC1P78348 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ASIC1P78348 AC140113.3-201ENST00000605663 199 ntBASIC20.29■□□□□ 0.84
ASIC1P78348 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ASIC1P78348 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ASIC1P78348 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ASIC1P78348 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.28■□□□□ 0.84
ASIC1P78348 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.28■□□□□ 0.84
ASIC1P78348 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.28■□□□□ 0.84
ASIC1P78348 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ASIC1P78348 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ASIC1P78348 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ASIC1P78348 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.28■□□□□ 0.84
ASIC1P78348 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ASIC1P78348 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ASIC1P78348 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ASIC1P78348 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ASIC1P78348 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ASIC1P78348 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ASIC1P78348 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ASIC1P78348 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.28■□□□□ 0.84
ASIC1P78348 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ASIC1P78348 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.28■□□□□ 0.84
ASIC1P78348 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ASIC1P78348 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ASIC1P78348 TERF1P1-201ENST00000311003 1181 ntBASIC20.28■□□□□ 0.84
ASIC1P78348 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms