Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5BP61020 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RAB5BP61020 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB5BP61020 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5BP61020 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
RAB5BP61020 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
RAB5BP61020 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5BP61020 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5BP61020 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
RAB5BP61020 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5BP61020 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RAB5BP61020 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.26□□□□□ -0.13
RAB5BP61020 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB5BP61020 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RAB5BP61020 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RAB5BP61020 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5BP61020 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5BP61020 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5BP61020 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5BP61020 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5BP61020 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB5BP61020 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5BP61020 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.26□□□□□ -0.13
RAB5BP61020 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5BP61020 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.26□□□□□ -0.13
RAB5BP61020 AC103834.1-201ENST00000520383 144 ntBASIC14.26□□□□□ -0.13
RAB5BP61020 AL033527.3-201ENST00000566366 1196 ntBASIC14.26□□□□□ -0.13
RAB5BP61020 AC010997.5-201ENST00000609182 354 ntBASIC14.26□□□□□ -0.13
RAB5BP61020 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5BP61020 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB5BP61020 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
RAB5BP61020 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB5BP61020 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB5BP61020 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
RAB5BP61020 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5BP61020 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5BP61020 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.26□□□□□ -0.13
RAB5BP61020 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB5BP61020 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RAB5BP61020 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RAB5BP61020 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB5BP61020 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB5BP61020 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RAB5BP61020 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB5BP61020 AC245052.3-201ENST00000450182 901 ntBASIC14.25□□□□□ -0.13
RAB5BP61020 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.25□□□□□ -0.13
RAB5BP61020 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB5BP61020 AC104640.1-201ENST00000562617 2109 ntBASIC14.25□□□□□ -0.13
RAB5BP61020 AL031848.2-201ENST00000607670 837 ntBASIC14.25□□□□□ -0.13
RAB5BP61020 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAB5BP61020 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB5BP61020 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RAB5BP61020 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
RAB5BP61020 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAB5BP61020 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB5BP61020 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5BP61020 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5BP61020 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB5BP61020 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB5BP61020 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5BP61020 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5BP61020 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAB5BP61020 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5BP61020 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB5BP61020 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RAB5BP61020 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RAB5BP61020 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB5BP61020 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
RAB5BP61020 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB5BP61020 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB5BP61020 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
RAB5BP61020 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB5BP61020 AC061975.6-201ENST00000579045 1553 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms