Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.42■□□□□ 0.38
CLDN6P56747 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN6P56747 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN6P56747 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN6P56747 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.42■□□□□ 0.38
CLDN6P56747 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN6P56747 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN6P56747 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN6P56747 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN6P56747 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLDN6P56747 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN6P56747 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN6P56747 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN6P56747 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.42■□□□□ 0.38
CLDN6P56747 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN6P56747 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN6P56747 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN6P56747 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN6P56747 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN6P56747 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
CLDN6P56747 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN6P56747 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN6P56747 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN6P56747 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN6P56747 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN6P56747 INTS4P1-201ENST00000438455 1935 ntBASIC17.41■□□□□ 0.38
CLDN6P56747 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN6P56747 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN6P56747 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN6P56747 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN6P56747 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.41■□□□□ 0.38
CLDN6P56747 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN6P56747 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.41■□□□□ 0.38
CLDN6P56747 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLDN6P56747 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN6P56747 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN6P56747 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN6P56747 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN6P56747 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLDN6P56747 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN6P56747 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN6P56747 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN6P56747 RPSAP43-201ENST00000402237 625 ntBASIC17.4■□□□□ 0.38
CLDN6P56747 UPF3AP3-201ENST00000420996 769 ntBASIC17.4■□□□□ 0.38
CLDN6P56747 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN6P56747 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.4■□□□□ 0.38
CLDN6P56747 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN6P56747 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 RNA5SP415-201ENST00000517246 115 ntBASIC17.4■□□□□ 0.38
CLDN6P56747 AC145285.3-201ENST00000564603 959 ntBASIC17.4■□□□□ 0.38
CLDN6P56747 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.4■□□□□ 0.38
CLDN6P56747 AC027796.2-201ENST00000575326 344 ntBASIC17.4■□□□□ 0.38
CLDN6P56747 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN6P56747 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN6P56747 LINC02084-201ENST00000606069 1096 ntBASIC17.4■□□□□ 0.38
CLDN6P56747 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.4■□□□□ 0.38
CLDN6P56747 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN6P56747 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CLDN6P56747 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLDN6P56747 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLDN6P56747 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLDN6P56747 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLDN6P56747 AC116562.4-201ENST00000641316 2276 ntBASIC17.4■□□□□ 0.38
CLDN6P56747 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN6P56747 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN6P56747 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.39■□□□□ 0.38
CLDN6P56747 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CLDN6P56747 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.39■□□□□ 0.38
CLDN6P56747 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLDN6P56747 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN6P56747 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN6P56747 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms