Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH6P55285 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH6P55285 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDH6P55285 AC005332.8-201ENST00000622750 2735 ntBASIC18.94■□□□□ 0.62
CDH6P55285 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.94■□□□□ 0.62
CDH6P55285 ATP5G1P1-201ENST00000448724 379 ntBASIC18.94■□□□□ 0.62
CDH6P55285 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CDH6P55285 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.94■□□□□ 0.62
CDH6P55285 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH6P55285 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH6P55285 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.94■□□□□ 0.62
CDH6P55285 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CDH6P55285 AL157888.1-201ENST00000631930 593 ntBASIC18.94■□□□□ 0.62
CDH6P55285 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH6P55285 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH6P55285 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH6P55285 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.94■□□□□ 0.62
CDH6P55285 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH6P55285 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH6P55285 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH6P55285 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH6P55285 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH6P55285 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH6P55285 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.93■□□□□ 0.62
CDH6P55285 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH6P55285 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH6P55285 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CDH6P55285 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH6P55285 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH6P55285 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH6P55285 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.93■□□□□ 0.62
CDH6P55285 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.93■□□□□ 0.62
CDH6P55285 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CDH6P55285 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH6P55285 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH6P55285 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH6P55285 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH6P55285 GCSHP2-201ENST00000560971 527 ntBASIC18.93■□□□□ 0.62
CDH6P55285 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.93■□□□□ 0.62
CDH6P55285 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH6P55285 AL023973.1-201ENST00000624619 620 ntBASIC18.93■□□□□ 0.62
CDH6P55285 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH6P55285 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.93■□□□□ 0.62
CDH6P55285 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CDH6P55285 FLJ13224-201ENST00000313737 1514 ntBASIC18.93■□□□□ 0.62
CDH6P55285 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
CDH6P55285 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CDH6P55285 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH6P55285 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH6P55285 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH6P55285 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CDH6P55285 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH6P55285 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.92■□□□□ 0.62
CDH6P55285 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CDH6P55285 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH6P55285 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CDH6P55285 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH6P55285 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH6P55285 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.92■□□□□ 0.62
CDH6P55285 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CDH6P55285 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH6P55285 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH6P55285 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH6P55285 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH6P55285 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH6P55285 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH6P55285 AL137013.1-201ENST00000432946 1228 ntBASIC18.92■□□□□ 0.62
CDH6P55285 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH6P55285 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH6P55285 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CDH6P55285 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.92■□□□□ 0.62
CDH6P55285 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CDH6P55285 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CDH6P55285 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH6P55285 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH6P55285 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH6P55285 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH6P55285 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH6P55285 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH6P55285 AC093010.1-201ENST00000473625 1624 ntBASIC18.92■□□□□ 0.62
CDH6P55285 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH6P55285 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH6P55285 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CDH6P55285 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH6P55285 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH6P55285 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH6P55285 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH6P55285 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDH6P55285 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH6P55285 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH6P55285 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH6P55285 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH6P55285 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH6P55285 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH6P55285 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH6P55285 TERF1P1-201ENST00000311003 1181 ntBASIC18.91■□□□□ 0.62
CDH6P55285 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH6P55285 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH6P55285 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDH6P55285 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms