Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC4P55056 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC4P55056 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC4P55056 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC4P55056 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC4P55056 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC4P55056 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC4P55056 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC4P55056 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.33□□□□□ -0.28
APOC4P55056 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.33□□□□□ -0.28
APOC4P55056 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC4P55056 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.33□□□□□ -0.28
APOC4P55056 TPSP2-201ENST00000561760 610 ntBASIC13.33□□□□□ -0.28
APOC4P55056 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC4P55056 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
APOC4P55056 AC004263.2-201ENST00000617183 678 ntBASIC13.33□□□□□ -0.28
APOC4P55056 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.33□□□□□ -0.28
APOC4P55056 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC4P55056 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOC4P55056 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
APOC4P55056 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.33□□□□□ -0.28
APOC4P55056 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
APOC4P55056 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOC4P55056 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.33□□□□□ -0.28
APOC4P55056 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
APOC4P55056 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.33□□□□□ -0.28
APOC4P55056 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
APOC4P55056 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC4P55056 GMCL1P1-201ENST00000463439 1581 ntBASIC13.32□□□□□ -0.28
APOC4P55056 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.32□□□□□ -0.28
APOC4P55056 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
APOC4P55056 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOC4P55056 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC4P55056 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC4P55056 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC4P55056 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC4P55056 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.32□□□□□ -0.28
APOC4P55056 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC4P55056 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC4P55056 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOC4P55056 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.32□□□□□ -0.28
APOC4P55056 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
APOC4P55056 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.32□□□□□ -0.28
APOC4P55056 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.32□□□□□ -0.28
APOC4P55056 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.32□□□□□ -0.28
APOC4P55056 AC246785.2-201ENST00000432512 513 ntBASIC13.32□□□□□ -0.28
APOC4P55056 TPM4P1-201ENST00000436100 807 ntBASIC13.32□□□□□ -0.28
APOC4P55056 NUS1P1-201ENST00000446295 882 ntBASIC13.32□□□□□ -0.28
APOC4P55056 AC111152.3-201ENST00000569699 673 ntBASIC13.32□□□□□ -0.28
APOC4P55056 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC4P55056 MIR3180-1-201ENST00000580374 94 ntBASIC13.32□□□□□ -0.28
APOC4P55056 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.32□□□□□ -0.28
APOC4P55056 MIR3180-3-201ENST00000584616 94 ntBASIC13.32□□□□□ -0.28
APOC4P55056 AL121772.3-201ENST00000610840 674 ntBASIC13.32□□□□□ -0.28
APOC4P55056 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC4P55056 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.32□□□□□ -0.28
APOC4P55056 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
APOC4P55056 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOC4P55056 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
APOC4P55056 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOC4P55056 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APOC4P55056 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC13.32□□□□□ -0.28
APOC4P55056 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC13.32□□□□□ -0.28
APOC4P55056 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC4P55056 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.32□□□□□ -0.28
APOC4P55056 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
APOC4P55056 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APOC4P55056 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.31□□□□□ -0.28
APOC4P55056 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
APOC4P55056 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC13.31□□□□□ -0.28
APOC4P55056 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC13.31□□□□□ -0.28
APOC4P55056 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.31□□□□□ -0.28
APOC4P55056 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
APOC4P55056 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
APOC4P55056 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.31□□□□□ -0.28
APOC4P55056 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
APOC4P55056 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.31□□□□□ -0.28
APOC4P55056 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.31□□□□□ -0.28
APOC4P55056 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC4P55056 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.31□□□□□ -0.28
APOC4P55056 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.31□□□□□ -0.28
APOC4P55056 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.31□□□□□ -0.28
APOC4P55056 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.31□□□□□ -0.28
APOC4P55056 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
APOC4P55056 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms