Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CENPAP49450 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.52■□□□□ 0.23
CENPAP49450 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CENPAP49450 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CENPAP49450 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CENPAP49450 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.52■□□□□ 0.23
CENPAP49450 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CENPAP49450 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CENPAP49450 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CENPAP49450 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.52■□□□□ 0.23
CENPAP49450 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CENPAP49450 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.52■□□□□ 0.23
CENPAP49450 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.52■□□□□ 0.23
CENPAP49450 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.52■□□□□ 0.23
CENPAP49450 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CENPAP49450 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CENPAP49450 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CENPAP49450 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CENPAP49450 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CENPAP49450 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.51■□□□□ 0.23
CENPAP49450 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.51■□□□□ 0.23
CENPAP49450 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CENPAP49450 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CENPAP49450 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CENPAP49450 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
CENPAP49450 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.51■□□□□ 0.23
CENPAP49450 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CENPAP49450 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.51■□□□□ 0.23
CENPAP49450 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CENPAP49450 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.51■□□□□ 0.23
CENPAP49450 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.51■□□□□ 0.23
CENPAP49450 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.51■□□□□ 0.23
CENPAP49450 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.51■□□□□ 0.23
CENPAP49450 AL049637.2-201ENST00000641778 930 ntBASIC16.51■□□□□ 0.23
CENPAP49450 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CENPAP49450 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CENPAP49450 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CENPAP49450 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CENPAP49450 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CENPAP49450 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CENPAP49450 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CENPAP49450 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.5■□□□□ 0.23
CENPAP49450 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.5■□□□□ 0.23
CENPAP49450 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CENPAP49450 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CENPAP49450 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CENPAP49450 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CENPAP49450 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.5■□□□□ 0.23
CENPAP49450 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CENPAP49450 AL023284.2-201ENST00000405850 579 ntBASIC16.5■□□□□ 0.23
CENPAP49450 CA15P1-201ENST00000481698 905 ntBASIC16.5■□□□□ 0.23
CENPAP49450 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CENPAP49450 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.5■□□□□ 0.23
CENPAP49450 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.5■□□□□ 0.23
CENPAP49450 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CENPAP49450 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.5■□□□□ 0.23
CENPAP49450 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.5■□□□□ 0.23
CENPAP49450 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.5■□□□□ 0.23
CENPAP49450 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CENPAP49450 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CENPAP49450 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CENPAP49450 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CENPAP49450 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CENPAP49450 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.5■□□□□ 0.23
CENPAP49450 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CENPAP49450 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CENPAP49450 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CENPAP49450 AC096733.2-201ENST00000609937 1394 ntBASIC16.5■□□□□ 0.23
CENPAP49450 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.5■□□□□ 0.23
CENPAP49450 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CENPAP49450 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CENPAP49450 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CENPAP49450 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.49■□□□□ 0.23
CENPAP49450 AC099343.3-201ENST00000605834 2503 ntBASIC16.49■□□□□ 0.23
CENPAP49450 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CENPAP49450 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CENPAP49450 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CENPAP49450 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CENPAP49450 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CENPAP49450 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.49■□□□□ 0.23
CENPAP49450 AC012618.2-201ENST00000428058 849 ntBASIC16.49■□□□□ 0.23
CENPAP49450 AC116562.2-201ENST00000507042 360 ntBASIC16.49■□□□□ 0.23
CENPAP49450 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.49■□□□□ 0.23
CENPAP49450 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.49■□□□□ 0.23
CENPAP49450 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CENPAP49450 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CENPAP49450 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.49■□□□□ 0.23
CENPAP49450 AC026471.5-201ENST00000615068 467 ntBASIC16.49■□□□□ 0.23
CENPAP49450 REXO1L10P-201ENST00000615707 1290 ntBASIC16.49■□□□□ 0.23
CENPAP49450 REXO1L12P-201ENST00000622156 912 ntBASIC16.49■□□□□ 0.23
CENPAP49450 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.49■□□□□ 0.23
CENPAP49450 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CENPAP49450 GPAT2P1-201ENST00000444924 1672 ntBASIC16.49■□□□□ 0.23
CENPAP49450 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CENPAP49450 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CENPAP49450 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CENPAP49450 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CENPAP49450 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CENPAP49450 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CENPAP49450 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms